Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev10g1124 ATGGCGAAACCAGGGCGAGGCCGTCGCTCGCCGCCGTCAGGATCCGTCTCCGGCTCCTCCTCCCGCTCCCGCTCCTCCTCACCCTCCGACTCTCGCTCCTCCTCCCGCTCGAGATCCCCGTCCCGATCCCTCTCTCGGTCACGATCTCCATCTCGCTCCAGATCCTTATCTTCCTCCTCCTCACCATCCCGCTCCTCCCGCAGCCGCAGCCGCAGCCCTCCCCCTCCGCGCCGCAGAAGTCCTGCTGAAGCAGCTAGGCGAGGTCGATCTCCTCCACCTCAGTCTAAAAGAACTTCTCCTCCTCCAAGGAAACCTTCTCCTGTACGTGAATCACTTGTTCTTCACGTAGAAAAGCTCAGTAGGAATGTCAATGAAGGCCATTTGAAAGAAATATTTAGTAACTTTGGCGAGGTTGTAAGTGTAGAGTTGGCGATGGATCGAACTGTCAATCTTCCGAAAGGATATGGGTATGTGCAATTCAAGACTAGAGCGGATGCTGAAAAAGCATTATTGTACATGGATGGTGCCCAAATAGATGGTAATGTTGTTAAGGCAAGATTTACTCTACCTCCAAGACAGAAAGTTTCACCTCCTCCAAAGTCTTCTGCTGTTACTCCGAAGAGAGATGCTCCTAGGGCTGATACTGCTGGTGCAGATGTTGAAAAGGATGGGCCAAAGCGACTAAGAGAATCTCCTCGGAGAAAACCTCCTCCCTCACCAAGAAGGAGATCTCCTGTGCCTCGAAGAGTTGGATCTCCTAGGCGACTAGATTCTCCTCGCCGTCGTGCGGATTCTCCTGTTCGTCGGCGATTAGACTCTCCTTATCGTCGTGGAGACACACCTCCTAGGAGGAGACCTGTGTCTCCTGGAAGAGGCCGCTCTCCGTCTCCACCAAGGCGTCTTCGATCCCCTGCAAGGGCATCTCCTAGAAGGATGCGTGGAAGCCCAGTTCGCAGACGATCGCCTCCTCCTCCTCTAAGGCGCCGTTCACCACCTAGGCGTGCTCGTAGTCCTCCTAGAAGATCTCCAATCAGTCGTAGACGCAGTCGCTCTCCAATTCGTAGGCCTGCACGCTCACGCTCGAGATCATTCTCACCTCGAAGAGGTAGACCACCTGTCAGACGAGGGAGATCTTCATCATACTCTGATTCACCAAGTCCACGCAAGGTATCTCGGAGATCAAAGAGTCGCAGCCCAAGAAGGCCTTTGAGAGGAAGAGGCAGTAGCAACAGCAGCAGCAGCAGTTCACCACCGCCACCACCACCACCACCACCACCTCGCAAGCCTTAG 1290 0.5465 MAKPGRGRRSPPSGSVSGSSSRSRSSSPSDSRSSSRSRSPSRSLSRSRSPSRSRSLSSSSSPSRSSRSRSRSPPPPRRRSPAEAARRGRSPPPQSKRTSPPPRKPSPVRESLVLHVEKLSRNVNEGHLKEIFSNFGEVVSVELAMDRTVNLPKGYGYVQFKTRADAEKALLYMDGAQIDGNVVKARFTLPPRQKVSPPPKSSAVTPKRDAPRADTAGADVEKDGPKRLRESPRRKPPPSPRRRSPVPRRVGSPRRLDSPRRRADSPVRRRLDSPYRRGDTPPRRRPVSPGRGRSPSPPRRLRSPARASPRRMRGSPVRRRSPPPPLRRRSPPRRARSPPRRSPISRRRSRSPIRRPARSRSRSFSPRRGRPPVRRGRSSSYSDSPSPRKVSRRSKSRSPRRPLRGRGSSNSSSSSSPPPPPPPPPPRKP* 430
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev10g1124 429 CDD RRM_RNPS1 114 186 IPR034201 -
Aev10g1124 429 MobiDBLite consensus disorder prediction 12 70 - -
Aev10g1124 429 MobiDBLite consensus disorder prediction 189 429 - -
Aev10g1124 429 MobiDBLite consensus disorder prediction 253 286 - -
Aev10g1124 429 MobiDBLite consensus disorder prediction 212 237 - -
Aev10g1124 429 MobiDBLite consensus disorder prediction 1 112 - -
Aev10g1124 429 Pfam RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 116 184 IPR000504 GO:0003723
Aev10g1124 429 Gene3D - 12 196 IPR012677 -
Aev10g1124 429 MobiDBLite consensus disorder prediction 414 429 - -
Aev10g1124 429 PANTHER BNAA09G56240D PROTEIN 27 410 - -
Aev10g1124 429 PANTHER RIBONUCLEIC ACID BINDING PROTEIN S1 27 410 - -
Aev10g1124 429 MobiDBLite consensus disorder prediction 304 374 - -
Aev10g1124 429 SUPERFAMILY RNA-binding domain, RBD 99 199 IPR035979 GO:0003676
Aev10g1124 429 SMART rrm1_1 113 186 IPR000504 GO:0003723
Aev10g1124 429 ProSiteProfiles Eukaryotic RNA Recognition Motif (RRM) profile. 112 190 IPR000504 GO:0003723
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev10g1124 114 187 Eukaryotic Initiation Factors Gene Family AT2G23350 32.432 7.40e-08 52.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev10g1124 K14325 - gmx:100783566 289.271