Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev10g1088 ATGATCATGGGGAAAGGAAGAGCACCATGTTGTGATAAGTCTCAAGTGAAGAAAGGACCTTGGAGCCCTGAAGAAGATCTTAAGCTCATAGCTTTCATTCAAAAACATGGCCATGAAAATTGGCGTGCTCTTCCCAAACAAGCAGGGCTTCTGCGATGTGGGAAAAGTTGTCGTTTGAGATGGATCAATTATCTCAGGCCTGATTTGAAGAGAGGCAATTTTACTTCAGAGGAAGAAGAAACCATAATAAGGCTACACAAGGCCTTAGGAAACAAGTGGTCCAAGATTGCTTCATATTTGCCTGGTAGAACTGACAATGAGATCAAGAATGTTTGGAACACACATTTGAAGAAAAGATTATCAGTGGTTTCAAAGAGTTCAGATTCATCAAGTGCTGATGAATCCAAGCTTGAATCATCAGTGACATCACCATCTTCATCTTCATCCGAGTCATTTTTCTCAAACAATGAGACACCAAAGAGTACTAATAATAATCCTGCAGGTAGTGAAATAACAGAGCAAGCTTCACAAGTGACAGAGCCAACAGAGGAAAAAATTGGTCAAGATGATTCAGAGAAAAAAGTGTCAAATAATATTGAGGATCCAAAAGGGTCATCAATTTCACTTTCTTCTGTTGAATCAAATATCTTAAACTCAAGCCAAGTTGTTGAGTACAACACACAACAACAAGAACTAGACTCTGCATTAACCTATTTTCTAGGACCCTATGATTCTACATTGGAAGCAGAGGTAGTGGATAAGCCAGACCAACTTGTTGAAATCCCTTGGGACTCAGATTATGATTTTTGGAATCTGATTGATAACATTGATCTCGAGCCGTTTGTCGCCACGTGTCCAGAGGTCGACCAGACGAGCGAACCCACGAAATTCGGAGATGAGATTGAAGCTAGGATGGAATGGTCCAAAGAGTTTGAGAATGAGTTTGGTGAAAAAATTATTGAGTCAATTAACAAGGATAAGTTGCCACAAAATGATTACCAAGCTGAGCAAGAAACAACAATAATGGACCAAGATAATGTATTTGATTTAGATCTTGTGTCTGAACCAGAATCTAAACTAGACTTTGGTTGTATTCAATTATGGCCCTCATCTGGTTGGCCTGATAATACTACTAGTCCTTAA 1143 0.392 MIMGKGRAPCCDKSQVKKGPWSPEEDLKLIAFIQKHGHENWRALPKQAGLLRCGKSCRLRWINYLRPDLKRGNFTSEEEETIIRLHKALGNKWSKIASYLPGRTDNEIKNVWNTHLKKRLSVVSKSSDSSSADESKLESSVTSPSSSSSESFFSNNETPKSTNNNPAGSEITEQASQVTEPTEEKIGQDDSEKKVSNNIEDPKGSSISLSSVESNILNSSQVVEYNTQQQELDSALTYFLGPYDSTLEAEVVDKPDQLVEIPWDSDYDFWNLIDNIDLEPFVATCPEVDQTSEPTKFGDEIEARMEWSKEFENEFGEKIIESINKDKLPQNDYQAEQETTIMDQDNVFDLDLVSEPESKLDFGCIQLWPSSGWPDNTTSP* 381
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev10g1088 380 ProSiteProfiles Myb-like domain profile. 13 65 IPR001005 -
Aev10g1088 380 CDD SANT 73 116 IPR001005 -
Aev10g1088 380 Gene3D - 73 144 - -
Aev10g1088 380 CDD SANT 20 65 IPR001005 -
Aev10g1088 380 ProSiteProfiles Myb-like domain profile. 66 116 IPR001005 -
Aev10g1088 380 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 13 65 IPR017930 -
Aev10g1088 380 MobiDBLite consensus disorder prediction 123 208 - -
Aev10g1088 380 SMART sant 17 67 IPR001005 -
Aev10g1088 380 SMART sant 70 118 IPR001005 -
Aev10g1088 380 Pfam Myb-like DNA-binding domain 71 116 IPR001005 -
Aev10g1088 380 Pfam Myb-like DNA-binding domain 18 65 IPR001005 -
Aev10g1088 380 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 66 120 IPR017930 -
Aev10g1088 380 PANTHER MYB FAMILY TRANSCRIPTION FACTOR 3 329 - -
Aev10g1088 380 MobiDBLite consensus disorder prediction 183 199 - -
Aev10g1088 380 Gene3D - 17 70 - -
Aev10g1088 380 MobiDBLite consensus disorder prediction 123 182 - -
Aev10g1088 380 PANTHER - 3 329 - -
Aev10g1088 380 SUPERFAMILY Homeodomain-like 16 112 IPR009057 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev10g1088 Aev-Chr10 14542848 14545996 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev10g1088 3 121 MYB Transcription Factor Family AT1G56160 82.353 7.04e-74 230
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Aev10g1088 Myb_DNA-binding 1.2e-14 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev10g1088 K09422 - gmx:100101836 386.341