Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev10g1082 ATGCTGTATCGCATGCCCATGTGTGTGGATGGTACCGGCTTAGTAAGGTATGGTTGCTGTGTTATTAGTAAGGATGAAGATGTTAGTATGATATTTGATTGTCATTGTCAATTTTCGAATTTACATGTTATAGAATTATATGTTGTTGTGGGAGAGTCAAATATTAGACATATCAGTTCTGGTGCATCTGCGCCAATGCCTGTAGTTGTCCAACGTGGCATAGATGATGTTGCTGCTGAGCAACCTGTGGTGACGTTGAGGGCACAACCATTGATTGAAGAAAATATAATGGTTGGTCCGTCACAAGTTGCGGGGTTCTTAGGTAATGTGAATGATTATGAGTCTCTTTTTCATGAGAACAACTACAACGAAGATGATTTTGATGATGACAACACTCAAGAATCATATCAAGTTTCAGATGATGATGATGATGACATAGATGGGATAGGTCAGGCAGAACCTCAATGTCATTTTTATAGTCAAAATGTTTCACAGCCTCAAGGTCAATCACAGGTTGGAGAAGTGGTGCACTACAGTACTCTTAATTTGGAGGCAATGGGGGGTGTCAATGAAGCCGGTTCTTCTTTGCTTGCTATTCCTGGTGATGTATCTGGGGAAAAGAACATTATTGTATTTTCACAGTTACTGCAGAATGAAATTAAGAAGAATCGTCAAGAGATGATTGGAAATATGATTGTATCTAGCTTTAGTAGGAGCGATCAATCTTTCACAGTTCAGGTGCAAGGACCAGTTGGAACTTGGAGTCAGAGAACTTTTGCTGTTAGGTTAGGGGAGCGAAAATGTGATTGTGGTTATTTTCAGGCTCTGCACTTTCCTTGTAGTCATGTTCTTGCTGCTTGCTCATATCCAGAGGTTAGGCTCGATTGGGTCGCTTATGTTGATGATGTTTACCGGATGGAAAATGTGTTGAATGTATATGCCATGGAATTTCCTCCAATTGCAAATGAAACAACATGGCCTATGTACTCCGGACCACGCTTGAGACCCGACCCTGAGCTCAGGAGGGCTAAAGAAGGAAGACCAGTTTCAACCAGGATTCGTAATGAGATGGATGATCAGGAGAGTGGTCAAGGGAAGCGTTGTGGTCTTTGCCGTCAGCAACTCAATTCGCGATTCACCACAAGTTACTTTGCACAGCTACCAGATCGGGTAAAATTTAGGATACCAACTGGATCTGAATGGCTATTGAAGGTTGAAAAAAGAGGTAATGAGGTTTGGCTGACCGATGGATGGACTGATTTTTTGGAGTCCTGCATGATTCAGAGCAAGCGTTTCATATGGATGCATTATGATGAATTAATGACATTTAAGATAAATATTCACGATGAAAATCATAACGAGATTGACTACAAGCCCATTGACGACGCATTAGATCTACGCTTTAATCCTGCACGCTAA 1419 0.413 MLYRMPMCVDGTGLVRYGCCVISKDEDVSMIFDCHCQFSNLHVIELYVVVGESNIRHISSGASAPMPVVVQRGIDDVAAEQPVVTLRAQPLIEENIMVGPSQVAGFLGNVNDYESLFHENNYNEDDFDDDNTQESYQVSDDDDDDIDGIGQAEPQCHFYSQNVSQPQGQSQVGEVVHYSTLNLEAMGGVNEAGSSLLAIPGDVSGEKNIIVFSQLLQNEIKKNRQEMIGNMIVSSFSRSDQSFTVQVQGPVGTWSQRTFAVRLGERKCDCGYFQALHFPCSHVLAACSYPEVRLDWVAYVDDVYRMENVLNVYAMEFPPIANETTWPMYSGPRLRPDPELRRAKEGRPVSTRIRNEMDDQESGQGKRCGLCRQQLNSRFTTSYFAQLPDRVKFRIPTGSEWLLKVEKRGNEVWLTDGWTDFLESCMIQSKRFIWMHYDELMTFKINIHDENHNEIDYKPIDDALDLRFNPAR* 473
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev10g1082 472 SUPERFAMILY DNA-binding pseudobarrel domain 372 450 IPR015300 -
Aev10g1082 472 SMART 26again6 266 293 IPR006564 GO:0008270
Aev10g1082 472 MobiDBLite consensus disorder prediction 123 141 - -
Aev10g1082 472 MobiDBLite consensus disorder prediction 120 141 - -
Aev10g1082 472 Gene3D - 364 452 IPR015300 -
Aev10g1082 472 Pfam SWIM zinc finger 243 288 IPR007527 GO:0008270
Aev10g1082 472 ProSiteProfiles Zinc finger SWIM-type profile. 259 291 IPR007527 GO:0008270
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev10g1082 Aev-Chr10 14506173 14509824 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev10g1082 374 467 B3 DNA Binding Superfamily AT1G49475 30.851 2.01e-10 58.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev10g1082 - - aip:107621404 192.971