Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev10g1044 ATGGATTCTGCTAGCGGTAACAAGGGAAAGACCAAAGAGCTCATAGTGTACACAAGAAGAAAGAAAGGCACTAGCTCTGGAAATATCGTGTCACGTCCCAAGGAACTCGTTTCCTCTGATCCGAAGCTCTCTGCGACCGTGGCTAAAATTGATGCCACTAAAACTGACGGCGGCTCACGCGAAATTGGAGATGATGGCAGTTACTATGACTGTGAGGTCTGCAATGATGGTGGAGACCTGATATGCTGCGACGTTTGCCCTCGCACGTTTCATCTTATATGCCTTAATCTGGAGTCTGTTCCTGAAGGAGATTGGCGATGCCCAACCTGCTCGGTTAATGGCGATATCGCGAAGAACAAAAACAAGTCGAAGAGTTTAGGCATCAAAAAGGACAAATTAACTAAGAAATCAAAAGGTGGCTCTAGCTTGTCTGGTTCAAAGGGCAAGAAGATATCAAAAAAATGA 465 0.4538 MDSASGNKGKTKELIVYTRRKKGTSSGNIVSRPKELVSSDPKLSATVAKIDATKTDGGSREIGDDGSYYDCEVCNDGGDLICCDVCPRTFHLICLNLESVPEGDWRCPTCSVNGDIAKNKNKSKSLGIKKDKLTKKSKGGSSLSGSKGKKISKK* 155
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev10g1044 154 SUPERFAMILY FYVE/PHD zinc finger 58 111 IPR011011 -
Aev10g1044 154 ProSitePatterns Zinc finger PHD-type signature. 71 110 IPR019786 -
Aev10g1044 154 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 60 151 IPR013083 -
Aev10g1044 154 MobiDBLite consensus disorder prediction 127 154 - -
Aev10g1044 154 ProSiteProfiles Zinc finger PHD-type profile. 68 113 IPR019787 -
Aev10g1044 154 SMART PHD_3 70 111 IPR001965 -
Aev10g1044 154 Pfam PHD-finger 71 111 IPR019787 -
Aev10g1044 154 PANTHER PHD FINGER PROTEIN 12 59 125 IPR042163 GO:0003714|GO:0045892
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev10g1044 26 111 PHD Transcription Factor Family AT4G14920 37.234 9.01e-16 71.6
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR PHD Aev10g1044 PHD 1.2e-08 CL0390
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev10g1044 - - lja:Lj0g3v0315929.1 122.864