Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev10g1039 ATGGACCAAACACTCCTTCTCGACCAGAACTTCCCTCTCTTCAAAAAACCCTCCAAAAACCCCAAACCACCACCATCCTCCGCCGCCACCACCAAAAACCCTAATAACTCCGACCTTCCCGCCGCCACCACAACCGACACCTCCTCCGCCGATGCAGCCACATTCGCAGACCTTGGACTCGCCGAATGGGCGGTAAAGACGTGCCGGGAGCTCGGGATGCGGCGTCCTCGGCGCGTGCAGTCGAACTGCATCCCGCCCGTGCTGGAGGGCCGTCACGTGCTCGGCATTGACGAGACCGGGAGCGGGAAGACGGCGGCGTTCGCGCTTCCGATCCTACACCGGCTGTCGGAGCACCCGTACGGCGTATTCGCGCTGGTTGTGACGCCGACGAGGGAGCTGGCGTTCCAGCTGGCGGAGCAGTTCAGGGCGCTGGGGTCGTGCCTGCACCTCCGGATTGCCGTGGTTGTCGGCGGCATGGACATGCTGAGGCAGGCGAAGGAGCTGACGGCGAGGCCGCACGTCGTCATCGCCACACCGGGGAGGATCAAGGCGTTGCTCGAAGAGAGTCCTGATATCCCTCCTGTTTTCTCCAGGACCAAGTTCCTTGTCTTAGATGAAGCAGATCGAGTCCTGGATGTTGGTTTTCAGGAGGAATTGAAATTTATCTTTAAGTGCTTGCCTGAAAATCGGCAAAACCTGTTCTTTTCAGCAACAACGACAAGTAATCTGCAAAAGTTGAGTGAGCGTTACCGAGATAAGCTGTATATCTACGAGGCATATGAAGGGTTCAAAACAGTTGAAACACTTAAGCAGCAGGGTATATTCATCCCTAAAAGGGTGAAGGAGGTATATTTGATGCATATTTTGGCTAACATGGAAGATACGGACATCCGGTCTGCCATTGTATTTATCTCCACGTGCAGAGATTGTCATCGTCTAAGTTTAATGATGGACGAGCTTGATCTAGAAGCTGCAGCTCTTTATTCATTCAAATCACAGGCTCAGAGGCTTGAGGCACTACAAAAGTTTAAATCAGGAAAGGTTTCTATACTGCTAGCAACAGATGTTGCCAGCCGTGGTTTGGATATTCCTACAGTTGACCTTGTTATCAATTACGATGTTCCGAGGTTTCCACGAGATTATGTTCATCGTGTTGGTCGTACTGCAAGAGCAGGTAGAGGAGGACTGGCTTTGAGCCTTGTCACCCAGAATGATGTTGATCTCATTCGTGAAATAGAAGCTCTTATTGAAAGGCAACTTGAAATGATTGAATACAAGGAAGACGAGGTGCTTTCTGTGATGAAAAAGGTTTTCAGTGCTAAAAATGTGGCGGAAATGAAGATGATGGATGATGGCTTTGAGGAGAAAGCAAAAGAGAGGAAAAAACAGAAACTGAAAATGCTGGCAGAGAGAGGGTTGCTAAAGAAAAGAAGTAAAAAGAGAAAAAGAAGCAAAGAATTTGCAGAGGAAGGTAAAATACAGAAAAAGGAAGAGGTAGTAGCATTAGCAGATAAATCATCACATAAGAAAAAGAGTAAGAAGAAGGAGAAAAGTTAG 1557 0.49 MDQTLLLDQNFPLFKKPSKNPKPPPSSAATTKNPNNSDLPAATTTDTSSADAATFADLGLAEWAVKTCRELGMRRPRRVQSNCIPPVLEGRHVLGIDETGSGKTAAFALPILHRLSEHPYGVFALVVTPTRELAFQLAEQFRALGSCLHLRIAVVVGGMDMLRQAKELTARPHVVIATPGRIKALLEESPDIPPVFSRTKFLVLDEADRVLDVGFQEELKFIFKCLPENRQNLFFSATTTSNLQKLSERYRDKLYIYEAYEGFKTVETLKQQGIFIPKRVKEVYLMHILANMEDTDIRSAIVFISTCRDCHRLSLMMDELDLEAAALYSFKSQAQRLEALQKFKSGKVSILLATDVASRGLDIPTVDLVINYDVPRFPRDYVHRVGRTARAGRGGLALSLVTQNDVDLIREIEALIERQLEMIEYKEDEVLSVMKKVFSAKNVAEMKMMDDGFEEKAKERKKQKLKMLAERGLLKKRSKKRKRSKEFAEEGKIQKKEEVVALADKSSHKKKSKKKEKS* 519
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev10g1039 518 Pfam DEAD/DEAH box helicase 78 246 IPR011545 GO:0003676|GO:0005524
Aev10g1039 518 ProSiteProfiles Superfamilies 1 and 2 helicase C-terminal domain profile. 268 431 IPR001650 -
Aev10g1039 518 MobiDBLite consensus disorder prediction 29 48 - -
Aev10g1039 518 PANTHER ATP-DEPENDENT RNA HELICASE DDX49-RELATED 52 484 - -
Aev10g1039 518 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 121 412 IPR027417 -
Aev10g1039 518 SMART ultradead3 72 272 IPR014001 -
Aev10g1039 518 Gene3D - 265 518 IPR027417 -
Aev10g1039 518 MobiDBLite consensus disorder prediction 1 48 - -
Aev10g1039 518 ProSitePatterns DEAD-box subfamily ATP-dependent helicases signature. 203 211 IPR000629 -
Aev10g1039 518 MobiDBLite consensus disorder prediction 468 518 - -
Aev10g1039 518 CDD DEADc_DDX49 55 258 - -
Aev10g1039 518 ProSiteProfiles DEAD-box RNA helicase Q motif profile. 53 81 IPR014014 GO:0003724
Aev10g1039 518 Coils Coil 409 429 - -
Aev10g1039 518 ProSiteProfiles Superfamilies 1 and 2 helicase ATP-binding type-1 domain profile. 84 257 IPR014001 -
Aev10g1039 518 CDD SF2_C_DEAD 269 401 - -
Aev10g1039 518 SMART helicmild6 311 392 IPR001650 -
Aev10g1039 518 MobiDBLite consensus disorder prediction 483 506 - -
Aev10g1039 518 PANTHER RNA HELICASE 52 484 - -
Aev10g1039 518 Gene3D - 25 257 IPR027417 -
Aev10g1039 518 Pfam Helicase conserved C-terminal domain 289 392 IPR001650 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev10g1039 Aev-Chr10 13963820 13968243 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev10g1039 53 421 Eukaryotic Initiation Factors Gene Family AT3G19760 29.921 3.38e-56 191
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev10g1039 K14778 - gmx:100804060 757.673