Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev10g1037 ATGGATAAGTCAGAGCAGACTCAACAACAGCAACAGCAGCAACAACAGCACGTGATGGGTGCTAACCAAATGGCTTATTCTTCCCACTACCAAACTGCTCCCATGATAGCTTCTGGCGCACCTGCTGTGCCCTCCCCGACACAGCCTCCAACTGCTTTCTCTAATTCTCCTCACCTTGCATACCAGCAAGCACAGCATTTCCATCATCAACAGCAGCAGCAGCAACAGCAGCAGCTTCAGGTGTTCTGGGCGAACCAAATGCAAGAAATCGAGCAAACAATCGACTTTAAAAACCACAGTCTCCCACTTGCTCGGATAAAGAAGATAATGAAAGCCGATGAAGATGTCCGGATGATCTCCGCAGAAGCTCCAGTCATATTTGCAAAAGCATGCGAAATGTTCATCTTGGAGTTGACTTTGCGATCTTGGATCCACACAGAAGAGAACAAGAGGAGAACTCTCCAAAAGAATGATATTGCAGCTGCTATTGCAAGAAATGATGTTTTCGATTTCTTGGTGGATATTATTCCTAGGGATGAGTTGAAAGAGGAAGGACTTGGAATAGCAAAGGCTACAATTCCACTTGTGGGTTCCCCTGCTGATATGCCGTATTATTATGTCCCTCCGCAGCATCCGGCAGGACCAACAGGGATGATCATGGGGAAGCCGGTTGATCAGGCAACAATGTATCCTACACAGCAGCCTCGACCTCCCATGGCTTTCATGCCATGGCCGCATGCACAACCCCAGCAACAGCAGCCATCCGAACAGGAACAAACTGACTCTTGA 789 0.4804 MDKSEQTQQQQQQQQQHVMGANQMAYSSHYQTAPMIASGAPAVPSPTQPPTAFSNSPHLAYQQAQHFHHQQQQQQQQQLQVFWANQMQEIEQTIDFKNHSLPLARIKKIMKADEDVRMISAEAPVIFAKACEMFILELTLRSWIHTEENKRRTLQKNDIAAAIARNDVFDFLVDIIPRDELKEEGLGIAKATIPLVGSPADMPYYYVPPQHPAGPTGMIMGKPVDQATMYPTQQPRPPMAFMPWPHAQPQQQQPSEQEQTDS* 263
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev10g1037 262 MobiDBLite consensus disorder prediction 228 262 - -
Aev10g1037 262 SUPERFAMILY Histone-fold 64 172 IPR009072 GO:0046982
Aev10g1037 262 MobiDBLite consensus disorder prediction 37 56 - -
Aev10g1037 262 Pfam Core histone H2A/H2B/H3/H4 54 163 IPR007125 GO:0003677
Aev10g1037 262 MobiDBLite consensus disorder prediction 1 21 - -
Aev10g1037 262 Gene3D Histone, subunit A 61 178 IPR009072 GO:0046982
Aev10g1037 262 MobiDBLite consensus disorder prediction 246 262 - -
Aev10g1037 262 PANTHER HISTONE-LIKE TRANSCRIPTION FACTOR CCAAT-RELATED 8 256 - -
Aev10g1037 262 PANTHER NUCLEAR TRANSCRIPTION FACTOR Y SUBUNIT C-9 8 256 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev10g1037 Aev-Chr10 13955381 13956169 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev10g1037 11 207 CCAAT-HAP5 Transcription Factor Family AT1G56170 71.717 3.75e-75 225
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NF-YC Aev10g1037 CBFD_NFYB_HMF 2.2e-17 CL0012
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev10g1037 K08066 - gmx:100796987 388.267