Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev10g1026 ATGGAACTAAGCACTTACTTCAACTATGATTTGCTTCTTCATCAAAACCCCATCTCAGAAATCTACACCAACAATAACAACTTCATTGAACCAACACAAGAAGAAGAACTAGCACAAAACTACTACTATCACAACAATAACAACAACAACATTTTGCCTTATTCTGATGAAACCTTCTTGTTTGATCCAAACACATTTCTTGACCCTTTTTTTTATTCTGACCCAAATGGTTTCCTCTGCTCTGATGAGAATCTTGTTCACCCTGCTTCTGATAATTTTGATGACCAACTTCTCAATTTCACTCCTTATTATGACCCTTTTATGTTCTCACTCAATGACATCTTCCAAACTGATCAAACAGATTGTTTCAACACAATCCTTCCATGTCCAAAACGCCAAAAATGCTTCCACCATGAGAATCAAAAAGAGCTTATTCCTGATGGGTTTGTGCCGAATCCATGTACTCTGCCCCAAACAGAGGAACTTCTTTTCTCTGCTTCTTCAGATCAGTTCACACCAGTTCCTCAGTTTCCACTTCAAGGCTGTGAGTTTGTTATTGGCGATTCTCACTCTGAGAAGAATGGTAATAATGGCAATGGTAGCGGTAACGGCGATGAGCAGAGGACGATATCGGCGCAGAGCATCGCGGCGAGGGAGAGGAGGAGGAAGATAACAGAGAAGACACAAGAGCTTGGGAAGTTGGTGCCTGGTGGACCTAAGATGAACACAGCTGAAATGCTCAATGCAGCTTCCAAGTATGTTAAGTTCCTTCAAGCACAAGTTGGAATGCTTCAATTTATGAACACATTTAAGGAAGAAGATAAGGAAGCTCCTCCAAGTGAAGAAAATCTTCAAGCTCTTGTTGCTTCTCCCTTTGTTCAAGAGAAGCTATACTCAGAGGAATTGTGCTTTGTTCCAAAAGAGTTTATTACCACTTTGGTAAATCATAGTGATGTTCAATCAAGGCCTAACATCCTTAAAGATCTCAAACAGCTTATTGGGACAGACATTGAAGAGAAGAAGAAGAAGGAACAACAATAA 1041 0.4006 MELSTYFNYDLLLHQNPISEIYTNNNNFIEPTQEEELAQNYYYHNNNNNNILPYSDETFLFDPNTFLDPFFYSDPNGFLCSDENLVHPASDNFDDQLLNFTPYYDPFMFSLNDIFQTDQTDCFNTILPCPKRQKCFHHENQKELIPDGFVPNPCTLPQTEELLFSASSDQFTPVPQFPLQGCEFVIGDSHSEKNGNNGNGSGNGDEQRTISAQSIAARERRRKITEKTQELGKLVPGGPKMNTAEMLNAASKYVKFLQAQVGMLQFMNTFKEEDKEAPPSEENLQALVASPFVQEKLYSEELCFVPKEFITTLVNHSDVQSRPNILKDLKQLIGTDIEEKKKKEQQ* 347
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev10g1026 346 Pfam Helix-loop-helix DNA-binding domain 214 258 IPR011598 GO:0046983
Aev10g1026 346 MobiDBLite consensus disorder prediction 190 208 - -
Aev10g1026 346 Gene3D - 206 277 IPR036638 GO:0046983
Aev10g1026 346 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 207 268 IPR036638 GO:0046983
Aev10g1026 346 PANTHER TRANSCRIPTION FACTOR BHLH83-RELATED 1 329 - -
Aev10g1026 346 MobiDBLite consensus disorder prediction 188 208 - -
Aev10g1026 346 PANTHER TRANSCRIPTION FACTOR BHLH52-RELATED 1 329 - -
Aev10g1026 346 CDD bHLH_AtbHLH_like 213 265 IPR045239 -
Aev10g1026 346 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 208 257 IPR011598 GO:0046983
Aev10g1026 346 SMART finulus 214 263 IPR011598 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev10g1026 Aev-Chr10 13834589 13836881 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev10g1026 204 337 Basic Helix-Loop-Helix Transcription Factor Gene Family AT1G30670 50.370 5.51e-32 119
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Aev10g1026 HLH 5.1e-06 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev10g1026 - - aip:107610272 251.906