Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev10g0942 ATGGCTCACCCTTGTTCAAACCAGGCCTTAGGTTGCTTTCTTATTTTTTCTATTGTTATCCCTTCTCTTTCAACCTTTTCTTATGCACATCATCCACTTATTGATCCAAAAGAAAATTTAACTACACCGGTTGATAACGTTGATGTTCAACCAAATAAAAGACTTAAAGATGCATATGTTGCTCTCCAAACATGGAAAGATGCTATCTACTCAGACCCTTTCAATACAACCGGTAACTGGGATGGTGAAAATGTTTGCTCATACAATGGTGTGTTTTGTGCTCCAGCTCTTGATGATCCTACATTGACGGTGGTTGCTGGTATTGATCTTAACAATGCAGACATCGCTGGGAATCTCCCAGAAGCGCTAGGCCTTTTGACAGATGTTACACTTTTTCATATCAACTCTAATAGATTTTGTGGAGTTCTCCCAAAAAGCTTAGAGAGACTCATTCTTATGTATGAGTTTGATATTAGCAACAATCGCTTTGTTGGTAGCTTCCCCGATGTGGTTCTCACATGGCCGTGCTTGAAGTACTTAGATATTAGATACAATAATTTTGAAGGAACTTTACCTCCAGAACTATTTGAGAAAGATCTAGATGCAATCTTTTTGAACAATAACCGTTTTACTTCTATTATTCCAGAAACTCTTGGAAAGTCAAAGGCCTCAGTGATCACTTTTGCTAACAATAAATTCACTGGTTGCATTCCAAATTCAATTGGGGACATGGAGAACTTGAATGAGATTATCTTCTTAGGTAATGACCTTGGAGGTTGTTTCCCAAAAGAGATTGAACTTCTAGAAAATGTGATTGTTTTGGATGTTAGCGGCAATGAGTTTGAAGGGACTTTACCTAACTTGTCAGGTTTGAAGAATGTGGAGATTATAAACATTGCAGACAACAACTTGAGTGGATATATCTCTAATACTATTTGCCAACTACCCTCATTGAGGAACTTCACATTCTCTGATAATTACTTTAATGGGGAAGCTCAAACTTGCAGGTGTTCATCCAATTCAACTATTATTGTTGATGACTCAAGAAATTGTTTGATAGGAAAAAAGAATCAAAAGTCTTCCAAACAATGCATATCGATGCTTACTCGCCCTCTAGATTGTAGCAAAAGGTGTGGTGGAAGCAAAACAATGTCACCCATAAAAGATAACCCACCTCCAAAACAAATACGAAATAAATCACCATCAATTACACCCATATTACCACAACCCATCCACTCTGTTGCAACCCCTATCCAATCACCTCCACCACCACCAGTGCACTCACCTCATCCCCCACCACCGGTAGTTTACTCACCTCCTCCCCCAATCCACCACTCCCCACCACCACCACCACCACCGGTAGTTCACTCACCTCCTCCTCCTGTCCACTCTCCACCACCACTAGTTAACTCACCACCTCCCCCAGTCCACTCCCCACCACCACTAGTAGTTAACTCGCCTCCACCACCAGTAGTTAACTCACCTCCACCTCCAGTCTACGCTCCACCACCACCAGTAGTTTACTCACCTCCTCCTCCAGTTCACTCCCCACCACCACCAGTAATTTACTCACCTCCTCCCCCAGTCCACTCCCCACCACCACCAGTAATTTACTCACCTCCTCCCCCAGTCCACTCCCCACCACCACCATCTATCCATTCTCCACCACCTCCTCCCCTAGTCCAATCCCCACCACCACCAGTTCACTCTCCTCCTCCTCCCCCTATTTATTCTCCACCACCACCGCCATTTAACTCTCCCCCTCCTCCAACCTATTCCCCACCACCACCGACATGGGAAGATATCAACCTTCCGCCACACTTTGGATCGCAATATAGTTCGCCTCCTCCACCGGTTTTTACTGGATACTGA 1872 0.438 MAHPCSNQALGCFLIFSIVIPSLSTFSYAHHPLIDPKENLTTPVDNVDVQPNKRLKDAYVALQTWKDAIYSDPFNTTGNWDGENVCSYNGVFCAPALDDPTLTVVAGIDLNNADIAGNLPEALGLLTDVTLFHINSNRFCGVLPKSLERLILMYEFDISNNRFVGSFPDVVLTWPCLKYLDIRYNNFEGTLPPELFEKDLDAIFLNNNRFTSIIPETLGKSKASVITFANNKFTGCIPNSIGDMENLNEIIFLGNDLGGCFPKEIELLENVIVLDVSGNEFEGTLPNLSGLKNVEIINIADNNLSGYISNTICQLPSLRNFTFSDNYFNGEAQTCRCSSNSTIIVDDSRNCLIGKKNQKSSKQCISMLTRPLDCSKRCGGSKTMSPIKDNPPPKQIRNKSPSITPILPQPIHSVATPIQSPPPPPVHSPHPPPPVVYSPPPPIHHSPPPPPPPVVHSPPPPVHSPPPLVNSPPPPVHSPPPLVVNSPPPPVVNSPPPPVYAPPPPVVYSPPPPVHSPPPPVIYSPPPPVHSPPPPVIYSPPPPVHSPPPPSIHSPPPPPLVQSPPPPVHSPPPPPIYSPPPPPFNSPPPPTYSPPPPTWEDINLPPHFGSQYSSPPPPVFTGY* 624
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev10g0942 623 MobiDBLite consensus disorder prediction 377 496 - -
Aev10g0942 623 Pfam Leucine rich repeat N-terminal domain 57 93 IPR013210 -
Aev10g0942 623 MobiDBLite consensus disorder prediction 395 409 - -
Aev10g0942 623 MobiDBLite consensus disorder prediction 534 602 - -
Aev10g0942 623 PRINTS Proline rich extensin signature 448 465 - -
Aev10g0942 623 PRINTS Proline rich extensin signature 468 493 - -
Aev10g0942 623 PRINTS Proline rich extensin signature 427 443 - -
Aev10g0942 623 PRINTS Proline rich extensin signature 401 422 - -
Aev10g0942 623 MobiDBLite consensus disorder prediction 534 623 - -
Aev10g0942 623 PANTHER LEUCINE-RICH REPEAT EXTENSIN-LIKE PROTEIN 3-RELATED 8 521 - -
Aev10g0942 623 MobiDBLite consensus disorder prediction 415 496 - -
Aev10g0942 623 PANTHER POLLEN-SPECIFIC LEUCINE-RICH REPEAT EXTENSIN-LIKE PROTEIN 2 8 521 - -
Aev10g0942 623 SUPERFAMILY L domain-like 58 339 - -
Aev10g0942 623 Gene3D Ribonuclease Inhibitor 57 357 IPR032675 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev10g0942 Aev-Chr10 12327281 12329152 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev10g0942 10 522 Trihelix Transcription Factor Family AT1G49490 50.280 1.11e-160 480
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev10g0942 - - gsj:114419228 580.482