Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev10g0885 ATGAGCAGAAACAATATGGATCAAAACCAGTATGGTCAATTTCCACCAATAGATGCTGATAATCTAGCACCAACACATATCCAAAACCAAACCCAATATACTACCAACATGATGGCACCGACCTACTCTGAATCTCAACTAATTGGTTACCCTTCATTCTACCAGCAAGAGCAACAATTCCCTGAATACTATAGCCTCCAGGAGGCTCCACCACAAGATCAATTGCAACAACAACTCAATGAATTTTGGGCATCTCAGCAAAGGAAAATTGAGGAAACTACTAATTTTAGAAAGAATGGTTTGCCTCTGGCCAGAATTAAAAAGATCATGAAAGCTAATGAGGAAGTTAATAACATAGCTGCTGAGTCTTGTGTTTTCTTTGCAAAGGCATGTGAAATGTTCATTATGGAACTGACAATGAGGTCATGGGTTAGTACAGAAGAAAACAAGAGGAAAACACTACAGAGGAGTGATATTGCAACAACAATTCAAATGACTGATGAGTATGACTTTTTGGCTAATATTGTACCAAAGGATGAAAATAACAAGGTGGGCCATGTTTATCATGAAGCGGCAATTTCACAAACACCTGGAAGGGATACTACTTGTGTTCCAATTCCAAATGTTCCTTCCTTTTATATGCCATCAACTCATCAGAGTTTTGCAGGTCCATCAAATTATACTACTCCAGGAGCAGATATGGAAGGGGTTAATTATCTTAATCAAGCTCATTATGAGCAGCAAACTTATCCTTATGTGCATCAAATGCAGTCACCTCCAGAACAGAAAAATTTCCCTTGTTCAAATTATCCAAATGTGTAA 822 0.3796 MSRNNMDQNQYGQFPPIDADNLAPTHIQNQTQYTTNMMAPTYSESQLIGYPSFYQQEQQFPEYYSLQEAPPQDQLQQQLNEFWASQQRKIEETTNFRKNGLPLARIKKIMKANEEVNNIAAESCVFFAKACEMFIMELTMRSWVSTEENKRKTLQRSDIATTIQMTDEYDFLANIVPKDENNKVGHVYHEAAISQTPGRDTTCVPIPNVPSFYMPSTHQSFAGPSNYTTPGADMEGVNYLNQAHYEQQTYPYVHQMQSPPEQKNFPCSNYPNV* 274
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev10g0885 273 Pfam Histone-like transcription factor (CBF/NF-Y) and archaeal histone 101 161 IPR003958 -
Aev10g0885 273 SUPERFAMILY Histone-fold 79 172 IPR009072 GO:0046982
Aev10g0885 273 MobiDBLite consensus disorder prediction 1 15 - -
Aev10g0885 273 Gene3D Histone, subunit A 63 178 IPR009072 GO:0046982
Aev10g0885 273 PANTHER NUCLEAR TRANSCRIPTION FACTOR Y SUBUNIT GAMMA 35 257 IPR027170 GO:0003700|GO:0006355|GO:0016602
Aev10g0885 273 MobiDBLite consensus disorder prediction 1 23 - -
Aev10g0885 273 PANTHER HISTONE-LIKE TRANSCRIPTION FACTOR CCAAT-RELATED 35 257 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev10g0885 Aev-Chr10 11430110 11430931 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev10g0885 79 198 CCAAT-HAP5 Transcription Factor Family AT1G56170 55.833 3.01e-44 147
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NF-YC Aev10g0885 CBFD_NFYB_HMF 4.3e-16 CL0012
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev10g0885 K08066 - zju:107423263 175.252