Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev10g0873 ATGATTACACGAAAGGTTGGTCCAGCCCTTGCATGTGGATGTACAGTGGTGATAAAGCCCTCTGAACTTACGCCTCTCACTGCTTTAGCTGCAGCAGAACTCTCTATTCAAGCTGGAATACCTGCGGGTGTTGTGAATGTGGTTATGGGAAATGCTCCTGAAATTGGGGATGCTTTACTTGCAAGTCCACAGGTACGCAAGATCACATTCACAGGCTCAACAGCTGTTGGAAAGAAATTGTTGGCTGGTTCTGCTGAGACTGTCAAAAAAGTATCTTTGGAACTTGGTGGCAATGCACCTTGCATAGTTTTTGATGATGCTGACCTGGATGTTGCAGTTAAAGGAACTATTGCAGCAAAGTTCCGTAATAGTGGACAAACATGTGTTTGTGCAAATAGAATTCTTGTGCAAGAAGGCATATATGAGAAATTTGCAAATGCTTTGCTTGATGCTGTTCAGAAGATGAAAGTTGGGGATGGTTTTAGTGAAGGTGTGGCTCAGGGCCCTCTGATCAATGAAGCTGCTGTGGAAAAGGTTGATTCCTTACTTCGTGATGCTACATCGAAGGGGGCAAAGGTAATTCTTGGAGGTAAAAGACATAGCCTTGGATTTACCTTTTATGAACCAACAGTCATCCGCGATGTCGACAATGAGATGCGCATATCAAGAGAGGAGGCATTTGGACCTGTCGCACCCCTCTTAAGGTTCAAAACTGAAGAGGATGCTATCCGAATTGCTAATGACACAAATGCAGGTTTGGGTTCATATTTATTTACCAACAGTATCCAACGCTCATGGCGTGTTGCTGAGGCTCTTGAATATGGACTTGTGGGTGTTAATGAAGGAGTAATCTCAACGGAGGTGGCACCATTTGGTGGCTTTAAACAGTCAGGCCTTGGAAGGGAAGGCTCTAAATATGGAATGGATGAGTATTTGGAGATCAAGTATGTGTGCTTGGGGAACATGAACAAAGAATGA 978 0.4397 MITRKVGPALACGCTVVIKPSELTPLTALAAAELSIQAGIPAGVVNVVMGNAPEIGDALLASPQVRKITFTGSTAVGKKLLAGSAETVKKVSLELGGNAPCIVFDDADLDVAVKGTIAAKFRNSGQTCVCANRILVQEGIYEKFANALLDAVQKMKVGDGFSEGVAQGPLINEAAVEKVDSLLRDATSKGAKVILGGKRHSLGFTFYEPTVIRDVDNEMRISREEAFGPVAPLLRFKTEEDAIRIANDTNAGLGSYLFTNSIQRSWRVAEALEYGLVGVNEGVISTEVAPFGGFKQSGLGREGSKYGMDEYLEIKYVCLGNMNKE* 326
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev10g0873 325 Pfam Aldehyde dehydrogenase family 1 317 IPR015590 GO:0016491
Aev10g0873 325 ProSitePatterns Aldehyde dehydrogenases cysteine active site. 121 132 IPR016160 GO:0016491
Aev10g0873 325 ProSitePatterns Aldehyde dehydrogenases glutamic acid active site. 93 100 IPR029510 GO:0016491
Aev10g0873 325 Gene3D Aldehyde Dehydrogenase; Chain A, domain 1 1 311 IPR016162 GO:0016491
Aev10g0873 325 CDD ALDH_F5_SSADH_GabD 1 319 - -
Aev10g0873 325 PANTHER SUCCINATE-SEMIALDEHYDE DEHYDROGENASE, MITOCHONDRIAL 1 322 - -
Aev10g0873 325 PANTHER SUCCINATE-SEMIALDEHYDE DEHYDROGENASE, MITOCHONDRIAL 1 322 - -
Aev10g0873 325 SUPERFAMILY ALDH-like 1 323 IPR016161 GO:0016491
Aev10g0873 325 Gene3D Aldehyde Dehydrogenase; Chain A, domain 2 97 286 IPR016163 GO:0016620
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev10g0873 Aev-Chr10 11323216 11330340 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev10g0873 1 325 Aldehyde Dehydrogenase Gene Family AT1G79440 82.154 0.0 538
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev10g0873 K17761 - gmx:100808318 595.504
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aev10g0873 10 11323216 11330340 Aev10g0873 10 11323216 11330340 ECH