Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev10g0871 ATGGAAAGAATGTTCCCTCCTAAGAAGCCCTCAACTATGAATTCACATGATAGACCCATGTGTGTTCAAGGTGACTCCGGTCTTGTCCTCACCACTGACCCTAAGCCTCGCCTCCGTTGGACCGTTGAGCTCCATGAGCGATTCGTCGACGCCGTCACCCAACTCGGAGGCCCAGATAAGGCCACACCTAAAACCATCATGAGGGTTATGGGTGTGAAGGGTCTCACCCTTTACCACCTCAAGAGCCATCTCCAGAAATTTAGGCTTGGTAAGCAGCCCCACAAGGAATTCAATGATCACTCGATTAAGGATGGTATGAGAGCTTCGGCTTTAGAACTGCAAAGAAATACTGCCTCCTCTTCTGCCATGATTGGCCGCAACATGAATGAGATGCAAATAGAGGTGCAGAGAAGATTGCATGAACAACTCGAGGTTCAAAAACATCTTCAACTAAGGATTGAGGCTCAAGGGAAATACATGCAAAGCATATTGGAGAAGGCATATCAAACACTTGCAGGTGAAAACATGGCATCTTCTGCTGCCAATAACATGAAGGGCATTGGAGGACAAGGCATCCCAGACATGGGAGTCATGAAAGATTATGGTTCCCCTTTGAATTTCACATCATTCCAAGACCTAGACATTTATGGTGGTGGTGACCAAATTGACCTTCAACAAAACTTGGAGAAGCCACCAACCCTTGATGGCTTCATGGCAATCAATGAGAGCCTTTGCTTGGGGAAGAACAAGAGGCCTAATAGTAATAACCCTTATAGTAGTGGGAGTAGTGGAAAAAGCCCTTTGATTTGGAGTGATGATCTTAGGCTTCAAGATTTGGGGACGGCGGCGGCGGCAGCAGCATCGTGCCTCGGTGATGACCCTTTTAAAGGTGGCGATCAGATCCAGATTGCACCACCTGGATCAATGGATAGAGGAAGTGACATTGACCCGATTTCGGATATGTATGACACCAAGCCTATGCTTCAAGGGGACAATAATAATAATGAGAAGAAATTTGATGCTTCTATGAAGCTTGAAAGGCCATCACCAAGAAGGGCACCCCTTCAAGCTGAAAGGATGAGTCCTATGATAAGCACCGGCACCTTGGCACAAGGTAGAAGCTCACCATTTGGGTGA 1137 0.4688 MERMFPPKKPSTMNSHDRPMCVQGDSGLVLTTDPKPRLRWTVELHERFVDAVTQLGGPDKATPKTIMRVMGVKGLTLYHLKSHLQKFRLGKQPHKEFNDHSIKDGMRASALELQRNTASSSAMIGRNMNEMQIEVQRRLHEQLEVQKHLQLRIEAQGKYMQSILEKAYQTLAGENMASSAANNMKGIGGQGIPDMGVMKDYGSPLNFTSFQDLDIYGGGDQIDLQQNLEKPPTLDGFMAINESLCLGKNKRPNSNNPYSSGSSGKSPLIWSDDLRLQDLGTAAAAAASCLGDDPFKGGDQIQIAPPGSMDRGSDIDPISDMYDTKPMLQGDNNNNEKKFDASMKLERPSPRRAPLQAERMSPMISTGTLAQGRSSPFG* 379
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev10g0871 378 Pfam MYB-CC type transfactor, LHEQLE motif 131 170 IPR025756 -
Aev10g0871 378 PANTHER MYB FAMILY TRANSCRIPTION FACTOR PHL11 4 327 IPR044848 GO:0003700
Aev10g0871 378 MobiDBLite consensus disorder prediction 1 20 - -
Aev10g0871 378 MobiDBLite consensus disorder prediction 337 353 - -
Aev10g0871 378 PANTHER MYB FAMILY TRANSCRIPTION FACTOR APL 4 327 - -
Aev10g0871 378 Gene3D - 34 92 - -
Aev10g0871 378 TIGRFAM myb_SHAQKYF: myb-like DNA-binding domain, SHAQKYF class 35 90 IPR006447 GO:0003677
Aev10g0871 378 MobiDBLite consensus disorder prediction 361 378 - -
Aev10g0871 378 MobiDBLite consensus disorder prediction 297 378 - -
Aev10g0871 378 Pfam Myb-like DNA-binding domain 38 86 IPR001005 -
Aev10g0871 378 MobiDBLite consensus disorder prediction 248 267 - -
Aev10g0871 378 SUPERFAMILY Homeodomain-like 34 90 IPR009057 -
Aev10g0871 378 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 32 92 IPR017930 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev10g0871 Aev-Chr10 11297626 11300490 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev10g0871 4 378 G2-like Transcription Factor Family AT1G79430 58.247 1.47e-128 372
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-G2-like Aev10g0871 Myb_DNA-binding 2.1e-06 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev10g0871 - - ccaj:109805894 611.298