Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev10g0854 ATGGCTCCAATGACTCTCCCACCTGGATTCAGGTTCCACCCTACAGATGAAGAGCTTGTTGCTTACTACTTAGAAAGAAAGATCACAGGTCGATCTATAGAGCTTGATATCATAGCTGAAGTTGATCTATACAAATGTGAACCTTGGGATTTGCCAGAAAAATCATTCCTGCCAAGCAAGGACATGGAGTGGTATTTTTACAGTCCAAGGGACAGGAAGTACCCAAATGGGTCAAGAACAAACAGAGCAACAAGAGCTGGTTACTGGAAAGCCACTGGGAAGGATAGGGCAGTTCACTCTCAGAAGAGGGCTCTTGGTATGAAGAAGACATTGGTGTATTACAAAGGAAGAGCACCCCATGGTATTAGAACCAATTGGGTTATGCATGAGTATCGCCTCCTTGAATCACTTCCCGCTACTTCTCATTCTTCTTTGAAGGATTCATATTCATTGTGCCGAATTTTCAAGAAGACAATTCAAATTCCAACCAAAGCTAAAGATGAAGAACAAGTTGGTGATGAGGATGGAAAGAAGGACATGATGTGGATCTCATCAGAAGAACAAGCATTAGGGGAAGACTCATCAAGTGGTGGCATTGAGATTTCAAGAGAAATGATGGAAAACAATGACATGGAATTACCAATCTATGGAAGCATGCACAATTATCAAATCCCAAACACACCATTAATGCTTGAAGATTTCCCACAAATGAATTTTTGCGATCAGACAAAGTCATCATCAACAACAATGAAGGCTGAAATGATGAACGAAGATAGCATCTTATATGAAAGATTCAGCCGAGACTGTATGAATGGAACACTAGAAGAGATCATTTCATTGTGTTGTTCCTCTCAAGACAACACTGTCTCTTTGCCAATGCTAGAGTGA 888 0.4077 MAPMTLPPGFRFHPTDEELVAYYLERKITGRSIELDIIAEVDLYKCEPWDLPEKSFLPSKDMEWYFYSPRDRKYPNGSRTNRATRAGYWKATGKDRAVHSQKRALGMKKTLVYYKGRAPHGIRTNWVMHEYRLLESLPATSHSSLKDSYSLCRIFKKTIQIPTKAKDEEQVGDEDGKKDMMWISSEEQALGEDSSSGGIEISREMMENNDMELPIYGSMHNYQIPNTPLMLEDFPQMNFCDQTKSSSTTMKAEMMNEDSILYERFSRDCMNGTLEEIISLCCSSQDNTVSLPMLE* 296
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev10g0854 295 SUPERFAMILY NAC domain 3 157 IPR036093 GO:0003677|GO:0006355
Aev10g0854 295 PANTHER NAC DOMAIN-CONTAINING PROTEIN 86-LIKE 1 163 - -
Aev10g0854 295 Pfam No apical meristem (NAM) protein 7 133 IPR003441 GO:0003677|GO:0006355
Aev10g0854 295 PANTHER NAC DOMAIN-CONTAINING PROTEIN 82-RELATED 1 163 - -
Aev10g0854 295 Gene3D NAC domain 15 160 IPR036093 GO:0003677|GO:0006355
Aev10g0854 295 ProSiteProfiles NAC domain profile. 6 157 IPR003441 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev10g0854 Aev-Chr10 11067034 11072326 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev10g0854 1 279 NAC Transcription Factor Family AT1G54330 53.035 1.23e-99 293
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Aev10g0854 NAM 5.1e-40 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev10g0854 - - gmx:100808325 382.874