Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev10g0852 ATGGGGCATCGTTGCTGCAGCAAACAGAAGATCAAAAGAGGACTCTGGTCTCCTGAAGAAGATGAGAAGCTTGTCAAATATATCACTACCCATGGACACAAAAGGTTGCAGAGATGTGGAAAGAGTTGCAGATTGAGATGGATAAATTATTTGAGGCCAGATCTGAAGAGGGGTTCCTTCACTGCAGAGGAAGAGCAGATCATAATTGACATTCATAGAATCCTCGGAAACAGTAATGCTCCCATTATTGAAACTAGTCAAACATTTTCTTCTTCTTCTTCACTACCTAATAAGTCTCAACAACAAACAAATGTTGGCATTGTTAATTCCTCTGAGTATCATCATAATAACAAATTCTTTGATTTTACTTATGAACCATCATCAATTGAGAACAACAATAATGGCCCCAACATTATTTGTTCTGCTTCTTGCATGAACCCTTCTGGGGTTGGAGTACTATGGGATTCAAGAGTTGATGATTGTGAAGATTTTGGAGTTCAAAGATTGGGAGAAGAGGAGGAAGAAGAAGAAGAAGGGGCAATTCAAGCACTACAAGTTCAGCAACAATTAGAGAAGGAGAAGAATTGTGAGAAGGGAACTATTATTGATGAAATGAGAGAAGCTACTAATAATAATTATGATAAGGGGAATGATCTTGAAATCAATTGTTCTACTTTGGAGAGCTCTAATAACTTTGATTTTGGGTTGTTGGAAAGTGTACTTAACTCTGAGTTTATGTCTCATGATGGTATCAACTATATGGATGAACTTGCTGCGTGGAACTTTTAG 789 0.3752 MGHRCCSKQKIKRGLWSPEEDEKLVKYITTHGHKRLQRCGKSCRLRWINYLRPDLKRGSFTAEEEQIIIDIHRILGNSNAPIIETSQTFSSSSSLPNKSQQQTNVGIVNSSEYHHNNKFFDFTYEPSSIENNNNGPNIICSASCMNPSGVGVLWDSRVDDCEDFGVQRLGEEEEEEEEGAIQALQVQQQLEKEKNCEKGTIIDEMREATNNNYDKGNDLEINCSTLESSNNFDFGLLESVLNSEFMSHDGINYMDELAAWNF* 263
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev10g0852 262 SUPERFAMILY Homeodomain-like 15 78 IPR009057 -
Aev10g0852 262 SMART sant 12 53 IPR001005 -
Aev10g0852 262 PANTHER MYB DOMAIN PROTEIN 55 1 82 - -
Aev10g0852 262 CDD SANT 16 51 IPR001005 -
Aev10g0852 262 Gene3D - 10 57 - -
Aev10g0852 262 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 8 55 IPR017930 -
Aev10g0852 262 Pfam Myb-like DNA-binding domain 16 66 - -
Aev10g0852 262 ProSiteProfiles Myb-like domain profile. 8 51 IPR001005 -
Aev10g0852 262 PANTHER BNAC05G40480D PROTEIN 1 82 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev10g0852 Aev-Chr10 11041985 11045137 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev10g0852 1 82 MYB Transcription Factor Family AT3G12720 74.725 3.85e-44 149
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Aev10g0852 Myb_DNA-bind_6 8.1e-08 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev10g0852 K09422 - gmx:100791209 153.68