LGRPv2

Gene search

Sequence information

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Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Aev10g0778	ATGCTGAGTGTGATTGATAAATCATTTAACATGGACATAATTCGAGCAACTGAAACCCATCTTCACTCATACTCCTCGCTGGGTTTAAGAACACTCGTTATTGGGATGAGGGAATTGAATGCTTCAGAGTTTGAGCAATGGCACGCCGCCTTTGAGTCTGCAAGCACTGCTCTGTTCGGTAGGGCTGCCATGCTCCGCAAGGTTGCTAGCAATGTAGAGAGCAACCTCTGTATCTTGGGTGCATCAGCTATAGAAGATAAACTGCAGCAAGGTGTGCCAGAAGCCATTGAGTCTCTAAGGACAGCAGCCTTGATTATTGACGGTACCAGCCTTGTATATATCCTTGACAGTGAACTAGAGGAGCAGTTATTTGACCTTGCATGTAAATGTTCTGTTGTTCTCTGTTGTCGAGTGGCACCGCTGCAAAAGGCTGGGATAGTTGCCCTTGTGAAGAATAGGACAACCGACATGACACTTGCCATTGGAGATGGTGCTAATGATGTCTCGATGATCCAAATGGCTGATGTTGGAGTCGGCATAAGTGGACAAGAGGGTCGTCAAGCTGTAATGGCATCAGATTTTGCTATGGGTCAGTTTAGATTTTTAGTTCCTCTCTTACTGATACATGGGCACTGGAATTACCAACGGCTGGGTTACATGATACTCTACAACTTCTACAGAAATGCTGTCCTTGTTCTAGTCTTATTTTGGTATGTGCTATACACTGCCTTCACTTTAACGACCGCCATAAATGAATGGAGCTCCACTTTGTATTCCATAATATACAGTTCATTGCCAACTATTGTAGTTGGAATTCTTGACAAGGATCTTGGTAAAAGGACTCTCCTCAGGTATCCTCAGCTTTACGGGGTCGGGCAGAGAGAAGAGGCCTACAACAAAAAATTGTTTATCTGGACAATGCTTGACACTTTGTGGCAAAGCATGACAATCTTCTGGGCACCCTTCTTTGCATATTGGAGCAGTACAGTTGATGTGGCAAGCATAGGAGATCTTTGGACCCTTGGAGTTGTCATTTCGGTTAATTTACACTTGGCCATGGATGTTTTCAGGTGGAATTGGGTAACTCATATTTCCATTTGGGGTTCCATCATTGCAACTTTCATCTGTATCATGATCATTGATGCTATTCCCTCGCTTCCAGGTTACTGGGCCTTCTTTCATGCTGCGCGCACTGGATTGTTCTGGTTATGTTTGCTCGGAGTCGTGATAACATCATTGCTTCCTCGTTTTCTTGTGAAATTTATCTGTCAATATTATTTTCCAAATGATATTCAAATTTCTAGAGAAGCAGAGAAGATTGGGACTCAAAGAGGCTCTTCTGAAGGTGGACAAATAGAAATGCTCCCTATCTCTCATGTTCAACCAAGATGA	1392	0.4339	MLSVIDKSFNMDIIRATETHLHSYSSLGLRTLVIGMRELNASEFEQWHAAFESASTALFGRAAMLRKVASNVESNLCILGASAIEDKLQQGVPEAIESLRTAALIIDGTSLVYILDSELEEQLFDLACKCSVVLCCRVAPLQKAGIVALVKNRTTDMTLAIGDGANDVSMIQMADVGVGISGQEGRQAVMASDFAMGQFRFLVPLLLIHGHWNYQRLGYMILYNFYRNAVLVLVLFWYVLYTAFTLTTAINEWSSTLYSIIYSSLPTIVVGILDKDLGKRTLLRYPQLYGVGQREEAYNKKLFIWTMLDTLWQSMTIFWAPFFAYWSSTVDVASIGDLWTLGVVISVNLHLAMDVFRWNWVTHISIWGSIIATFICIMIIDAIPSLPGYWAFFHAARTGLFWLCLLGVVITSLLPRFLVKFICQYYFPNDIQISREAEKIGTQRGSSEGGQIEMLPISHVQPR*	464

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Annotation information

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Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Aev10g0778	463	PANTHER	PHOSPHOLIPID-TRANSPORTING ATPASE	103	463	-	-
	Aev10g0778	463	PANTHER	PROBABLE PHOSPHOLIPID-TRANSPORTING ATPASE	1	103	-	-
	Aev10g0778	463	Pfam	haloacid dehalogenase-like hydrolase	152	179	-	-
	Aev10g0778	463	Gene3D	-	5	86	IPR023299	GO:0000166
	Aev10g0778	463	PANTHER	PHOSPHOLIPID-TRANSPORTING ATPASE	1	103	-	-
	Aev10g0778	463	SUPERFAMILY	Calcium ATPase, transmembrane domain M	210	428	IPR023298	-
	Aev10g0778	463	TIGRFAM	ATPase_P-type: HAD ATPase, P-type, family IC	131	247	IPR001757	GO:0005215\|GO:0005524\|GO:0016021\|GO:0016887
	Aev10g0778	463	TIGRFAM	ATPase-Plipid: phospholipid-translocating P-type ATPase, flippase	101	436	IPR006539	GO:0000287\|GO:0005524\|GO:0015914\|GO:0016021\|GO:0140326
	Aev10g0778	463	Pfam	Phospholipid-translocating P-type ATPase C-terminal	189	429	IPR032630	-
	Aev10g0778	463	Gene3D	-	100	201	IPR023214	-

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Duplication type information

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Select	Gene	Chromosome	Start	End	Duplicated_type
	Aev10g0778	Aev-Chr10	9951176	9954898	Dispersed/Transposed

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Functional genes information

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Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Aev10g0778	1	454	Primary Pumps ATPases	AT5G04930	61.047	0.0	652

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Pathway information

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Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Aev10g0778	K14802		-	gmx:100813836	625.935

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