Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev10g0733 ATGGCCGCCGCCGCCCCCGCAACCGCCGCACCACCGCGACAGCTGTCACAGAAGGAGCAGGACATTCAGATGATGCTCGCAGCTGAGGTTCACCTGGGAACCAAAAACTGCGACTTCCAGATGGAGCGTTACGTCTTCAAGCGCCGCAATGACGGTATTTATATCATTAACCTTGGCAAGACATGGGAGAAGCTTCACCTTGCTGCTAGGATTATCGTTGCCATTGAGAACCCTCAGGATATCATTGTCCAGTCTGCCAGGCCTTATGGTCAGAGAGCCGTGCTTAAGTTTGCTCAATACACTGGAGCTAATGCCATTGCTGGAAGGCACACTCCTGGAACATTCACCAATCAGATGCAGACATCCTATAATGAGCCTCGCCTTCTCATTCTAACTGATCCAAGAACTGATCATCAGCCCATTAAGGAAGGTGCTCTTGGAAACATTCCAACTATTGCTTTTTGCGATACCGATTCTCCAATGCGGTATGTTGATGTTGGTATTCCTGCCAATAACAAGGGAAAGCACAGTATTGGTTGTCTCTTTTGGCTATTAGCAAGGATGGTTCTGCAGATGCGGAATGCCATTCTTCCAGGGAAAAAGTGGGATGTCATGGTTGATTTATTCTTCTATAGAGAACCTGAAGAGACCAAGCAACAAGAGGAGGAGGAAGCACCAGCAGCCCCGGAGTATGCCATTGACTTTAATTCTTCTGCTATTGCCAGCTTCCCTGCTGCTGATGGCAACGAATGGCCTGCTACAGACCAACCTTGGACCGAGGCAGCTGCACAACCAATCCCGGCAGCCCCTGCTAATTGGACCCAAGAAACTGGTGAATGGGGTGAGACTGTCCCAGCTCCACAAGTTTCTGTGCCCGCCGCACCAAATGTTGCGGCAACAGGCTGGGAATAA 912 0.5022 MAAAAPATAAPPRQLSQKEQDIQMMLAAEVHLGTKNCDFQMERYVFKRRNDGIYIINLGKTWEKLHLAARIIVAIENPQDIIVQSARPYGQRAVLKFAQYTGANAIAGRHTPGTFTNQMQTSYNEPRLLILTDPRTDHQPIKEGALGNIPTIAFCDTDSPMRYVDVGIPANNKGKHSIGCLFWLLARMVLQMRNAILPGKKWDVMVDLFFYREPEETKQQEEEEAPAAPEYAIDFNSSAIASFPAADGNEWPATDQPWTEAAAQPIPAAPANWTQETGEWGETVPAPQVSVPAAPNVAATGWE* 304
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev10g0733 303 PANTHER 40S RIBOSOMAL PROTEIN SA 14 294 IPR005707 GO:0003735|GO:0006412|GO:0015935
Aev10g0733 303 Hamap 40S ribosomal protein SA [rps-0]. 9 254 IPR027498 GO:0003735|GO:0006412|GO:0015935
Aev10g0733 303 ProSitePatterns Ribosomal protein S2 signature 2. 126 150 IPR018130 GO:0003735|GO:0005840|GO:0006412
Aev10g0733 303 CDD RPS2 25 191 IPR001865 GO:0003735|GO:0005840|GO:0006412
Aev10g0733 303 ProSitePatterns Ribosomal protein S2 signature 1. 22 33 IPR018130 GO:0003735|GO:0005840|GO:0006412
Aev10g0733 303 PANTHER 40S RIBOSOMAL PROTEIN SA 14 294 - -
Aev10g0733 303 SUPERFAMILY Ribosomal protein S2 17 207 IPR023591 -
Aev10g0733 303 Gene3D - 21 227 - -
Aev10g0733 303 TIGRFAM uS2_euk_arch: ribosomal protein uS2 18 213 IPR005707 GO:0003735|GO:0006412|GO:0015935
Aev10g0733 303 PRINTS Ribosomal protein S2 signature 52 61 IPR001865 GO:0003735|GO:0005840|GO:0006412
Aev10g0733 303 PRINTS Ribosomal protein S2 signature 164 178 IPR001865 GO:0003735|GO:0005840|GO:0006412
Aev10g0733 303 PRINTS Ribosomal protein S2 signature 126 143 IPR001865 GO:0003735|GO:0005840|GO:0006412
Aev10g0733 303 PRINTS Ribosomal protein S2 signature 101 118 IPR001865 GO:0003735|GO:0005840|GO:0006412
Aev10g0733 303 PRINTS Ribosomal protein S2 signature 22 40 IPR001865 GO:0003735|GO:0005840|GO:0006412
Aev10g0733 303 PRINTS Ribosomal protein S2 signature 143 154 IPR001865 GO:0003735|GO:0005840|GO:0006412
Aev10g0733 303 Pfam Ribosomal protein S2 25 120 IPR001865 GO:0003735|GO:0005840|GO:0006412
Aev10g0733 303 MobiDBLite consensus disorder prediction 244 303 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev10g0733 Aev-Chr10 8979012 8981349 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev10g0733 1 303 Cytoplasmic Ribosomal Protein Gene Family AT3G04770 69.281 8.08e-152 424
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev10g0733 K02998 - gmx:100786575 461.84