Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev10g0732 ATGCAAGCTTTGATGTCAGCTAGGGTTCTTGTCCTTGTTGGGGAATCATTACCCATTAGAAGGGCTTTGGCCACTTCTAGAACTGCTTTTTTCCACACAACAAGTGTTCATTGTATGAGCCAAGTTGAACAACCCCATCATGGTTCCCTCACTCTTTCAAGTGTTGGCTTCCAAACTGAAACTGAACCAATTAAAAAATTCAAGTCAAGTAAGATCAAGCCATTAGGGTCCTCCTCTGAGTCCCTCAAGGGCAAAGGGAAGAACCCTTCTTTTGGCATCGATGAGAGGAAGAAGAGGAATAAACTGCCAATTGAGGCTGCCCCATTTGCTGTGAATTCGTTTTCTGAGCTTGGATTGCCTCATGCTCTGATTGAGAGGCTGGAAAATGAGGGGTTTGATGTTCCAACTGAAGTTCAGTCTGCTGCAGTTCCTACCATTTTGAAGAACCATGATGTTATAATTCAGTCTTACACTGGTTCTGGGAAGACGTTGGCTTATCTGCTTCCTATACTATCTGCTATTGGTCCATTTAGGAACAAGATTCACGGGGGTGATGGTGATGGTGATAATGGTGGTGGTGATCCTGGGAGGAAAATGGGAATTGAAGCTGTGGTTGTTGCTCCTTCTAGGGAGCTTGGGATGCAGATAGTGAGGGAGTTTGAGAAGATACTTGGAGTGGAGAACAGGAAAGTTGTTCAGCAGCTTGTGGGGGGTGCTAACCGAACCAGGCAGGAAGAAGCCCTCAAGAAGAATAAGCCTGCCATTGTTGTTGGTACGCCTGGTAGGATAGCGGAGCTTAGTGCATCCGGGAAGCTGCGCACACACGGCTGCCGTTTCTTGGTGTTGGATGAAGTTGATGAACTCCTGTCATTCAATTTCCGGGAGGACATGCACCGGATATTGGAGCATGTAGGGAGAAGATCAGGTGCAGACCCGAATCCAAATGATAAGAAGGTTGAGCGCCAGTTGATTATGGTCTCTGCAACTGTGCCGTTTTCTGTTGTGAGGGCAGCTAGGAGCTGGGGATGTGACCCACTTCTTGTCCAAGCAAAGAAAGTTGTATCACTTGACACTATCTCACCTTCTGGACCTGTCAATTTGTCGAAGACTTCACCCGGCCCTACCCCTAACCAATCTGCACCGTCTCAGGCATCAGTAGAGAGTCTACCTCCTGCATTAAAGCACTATTACTGTATTACAAGGTTGCAGCACAAAGTTGATGCACTTAGAAAGTGTATCCATGCCCTTGATGCCAAGGTTGTAATAGTTTTCATGAACAACACGAAACAGCTAAAGGATGTTGTCTTCAAGCTGGAGGCCCGCGGGGTGATAGCTGCAGAGTTACATGGGGATCTTGGGAAGCTTGCTAGGTCAACAACTCTGAAGAAATTCAAGAACGGTGAGGTTAGAGTTTTGGTGACAAATGAATTATCAGCTAGGGGTTTGGATGTAGCAGAATGTGATCTTGTGGTTAATCTGGACCTACCTACCGATTCAATTCACTATGCACACCGAGCTGGTCGAACAGGCCGGCTTGGTAGGGAGGGTACTGTGCTGACCGTATGCGAAGAGTCAGAAGTGTTTGTTGTGAGGAAAATGGAGAAGCAGCTTGGAGTTCCAATTGCATGCTGTGATTTTGTCGAGGGAAATCTGCTTGTCACTGAAGAAGAGAAAGCACTCAGCACTCCTAGTAAATGA 1698 0.467 MQALMSARVLVLVGESLPIRRALATSRTAFFHTTSVHCMSQVEQPHHGSLTLSSVGFQTETEPIKKFKSSKIKPLGSSSESLKGKGKNPSFGIDERKKRNKLPIEAAPFAVNSFSELGLPHALIERLENEGFDVPTEVQSAAVPTILKNHDVIIQSYTGSGKTLAYLLPILSAIGPFRNKIHGGDGDGDNGGGDPGRKMGIEAVVVAPSRELGMQIVREFEKILGVENRKVVQQLVGGANRTRQEEALKKNKPAIVVGTPGRIAELSASGKLRTHGCRFLVLDEVDELLSFNFREDMHRILEHVGRRSGADPNPNDKKVERQLIMVSATVPFSVVRAARSWGCDPLLVQAKKVVSLDTISPSGPVNLSKTSPGPTPNQSAPSQASVESLPPALKHYYCITRLQHKVDALRKCIHALDAKVVIVFMNNTKQLKDVVFKLEARGVIAAELHGDLGKLARSTTLKKFKNGEVRVLVTNELSARGLDVAECDLVVNLDLPTDSIHYAHRAGRTGRLGREGTVLTVCEESEVFVVRKMEKQLGVPIACCDFVEGNLLVTEEEKALSTPSK* 566
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev10g0732 565 Pfam Helicase conserved C-terminal domain 406 513 IPR001650 -
Aev10g0732 565 SMART helicmild6 432 513 IPR001650 -
Aev10g0732 565 ProSiteProfiles Superfamilies 1 and 2 helicase ATP-binding type-1 domain profile. 143 348 IPR014001 -
Aev10g0732 565 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 202 535 IPR027417 -
Aev10g0732 565 ProSiteProfiles DEAD-box RNA helicase Q motif profile. 112 140 IPR014014 GO:0003724
Aev10g0732 565 PANTHER DEAD-BOX ATP-DEPENDENT RNA HELICASE 47, MITOCHONDRIAL 22 541 - -
Aev10g0732 565 SMART ultradead3 131 368 IPR014001 -
Aev10g0732 565 PANTHER DEAD-BOX ATP-DEPENDENT RNA HELICASE 47, MITOCHONDRIAL 22 541 - -
Aev10g0732 565 CDD DEADc 123 349 - -
Aev10g0732 565 Pfam DEAD/DEAH box helicase 136 334 IPR011545 GO:0003676|GO:0005524
Aev10g0732 565 Gene3D - 87 350 IPR027417 -
Aev10g0732 565 MobiDBLite consensus disorder prediction 68 95 - -
Aev10g0732 565 CDD SF2_C_DEAD 393 522 - -
Aev10g0732 565 Gene3D - 390 546 IPR027417 -
Aev10g0732 565 MobiDBLite consensus disorder prediction 364 385 - -
Aev10g0732 565 ProSiteProfiles Superfamilies 1 and 2 helicase C-terminal domain profile. 408 552 IPR001650 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev10g0732 Aev-Chr10 8974151 8975848 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev10g0732 111 541 Eukaryotic Initiation Factors Gene Family AT3G19760 23.843 9.28e-44 159
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev10g0732 - - aip:107613119 857.825