Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev10g0553 ATGGCCAACGCGGAAGTGAAAGCGGTGGTTCCCGAATCAGTGTTGAAGAAGCAGAAGAGGAGTGAGGAGTGGGCTCTTGCGAAAACCCAGGAGCTTGAGGCCGCGAAGAAGAAGAGGGTCGAAACGCGGAAATTGATCTTCAACAGGGCCAAACAGTACGCAAAGGAATACGATGAGCAGGACAAGGAGTTGATTAGGTTGAAGCGTGAAGCCAAGCTTAAGGGCGGGTTTTATGTCGACCCTGAAGCTAAGCTCTTGTTCATCATCAGGATCCGTGGTATCAATGCCATAGACCCAAAAACAAGGAAGATTTTGCAGCTTCTGCGTTTGAGACAGATCTTCAATGGTGTCTTTCTCAAGGTTAACAAAGCAACCATTAATATGCTTCACAGGGTGGAGCCTTATGTCACCTATGGGTACCCTAACTTGAAGAGTGTAAAAGAACTTATTTACAAGAGAGGCTTTGGAAAAGTTGATAAGCAGAGAATTCCTTTGACAGACAACTCTATTATCGAACAGACTTTGGGGAAGCATGGAATTATTTGCGTGAAGATCTGA 558 0.4534 MANAEVKAVVPESVLKKQKRSEEWALAKTQELEAAKKKRVETRKLIFNRAKQYAKEYDEQDKELIRLKREAKLKGGFYVDPEAKLLFIIRIRGINAIDPKTRKILQLLRLRQIFNGVFLKVNKATINMLHRVEPYVTYGYPNLKSVKELIYKRGFGKVDKQRIPLTDNSIIEQTLGKHGIICVKI* 186
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev10g0553 185 Gene3D - 85 183 IPR036919 -
Aev10g0553 185 PANTHER 60S RIBOSOMAL PROTEIN L7-RELATED 4 184 - -
Aev10g0553 185 ProSitePatterns Ribosomal protein L30 signature. 104 136 IPR018038 -
Aev10g0553 185 Pfam Ribosomal protein L30p/L7e 86 136 IPR016082 -
Aev10g0553 185 SUPERFAMILY Ribosomal protein L30p/L7e 85 183 IPR036919 -
Aev10g0553 185 Coils Coil 50 70 - -
Aev10g0553 185 CDD Ribosomal_L7_archeal_euk 85 184 IPR035808 -
Aev10g0553 185 PANTHER 60S RIBOSOMAL PROTEIN L7 4 184 IPR039699 -
Aev10g0553 185 Pfam Ribosomal L30 N-terminal domain 10 81 IPR012988 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev10g0553 Aev-Chr10 6048934 6051051 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev10g0553 1 183 Cytoplasmic Ribosomal Protein Gene Family AT3G13580 85.246 1.30e-111 316
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev10g0553 K02937 - gmx:100500011 315.849