Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev10g0541 ATGGGTGAACAGGTTAAGGCAATTGTTCCAGAGTCTGTGCTGAAGAAGAGGAAGAGAGAGGAGGAGTGGGCTTTGGCCAAGAAGCAGGAGCTTGATGCTGCCAAGAAGAAGAGAGCTGAGAGCCAAAATCCACCACCATCACCAATCCAAACTCAGCCAGAGGCTGAAGAAAGGGAACTGATTCAGTTGAAGCGTGAGGCAAAGCTGAAGGGTGGATTTTATGTTGATCCTGAGGCTAAGCTCTTGTTTATTATCCGCATTCGTGGTATTAATGCCATGCACCCCAAGACAAGGAAAATCTTGCAGCTGTTGCGGTTGAGACAGATCTTCAACGGTGTGTTCCTTAAGGTTAACAAGGCTACAATGGACATGCTTTACAGAGTTGAGCCCTATGTGACTTATGGAGAATTGCCCTCACTGACTATGAGCTCCTCATTTATAATCAAACCTTTATTATCAAATTCACTTTTTTTGTACTCATTCTCTGCATGCTACTACCTTGCTTGGGTGACACTTCAAGCATTGGGCAAGTTTGGAATCATCTCCATTGAAGATCTTATCCATGAGATCATTACTGTTGGACCCCATTTTAAGGAAGCAAACAACTTCCTTTGGCCTTTTAAGCTGAAGGCTCCATTGGGTGGCTTAAAGAAGAAGAGGAACCACTATGTCGAAGGAGGGGATGCTGGAAACATGGAGAACTACATCAATGAGCTAATCAGGAGAATGAATTAG 735 0.4408 MGEQVKAIVPESVLKKRKREEEWALAKKQELDAAKKKRAESQNPPPSPIQTQPEAEERELIQLKREAKLKGGFYVDPEAKLLFIIRIRGINAMHPKTRKILQLLRLRQIFNGVFLKVNKATMDMLYRVEPYVTYGELPSLTMSSSFIIKPLLSNSLFLYSFSACYYLAWVTLQALGKFGIISIEDLIHEIITVGPHFKEANNFLWPFKLKAPLGGLKKKRNHYVEGGDAGNMENYINELIRRMN* 245
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev10g0541 244 MobiDBLite consensus disorder prediction 32 54 - -
Aev10g0541 244 SUPERFAMILY Ribosomal protein L30p/L7e 81 244 IPR036919 -
Aev10g0541 244 ProSitePatterns Ribosomal protein L30 signature. 100 132 IPR018038 -
Aev10g0541 244 CDD Ribosomal_L7_archeal_euk 81 244 IPR035808 -
Aev10g0541 244 Gene3D - 81 244 IPR036919 -
Aev10g0541 244 Pfam Ribosomal protein L30p/L7e 82 132 IPR016082 -
Aev10g0541 244 PANTHER 60S RIBOSOMAL PROTEIN L7-RELATED 5 244 - -
Aev10g0541 244 PANTHER 60S RIBOSOMAL PROTEIN L7 5 244 IPR039699 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev10g0541 Aev-Chr10 5948850 5960835 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev10g0541 4 244 Cytoplasmic Ribosomal Protein Gene Family AT3G13580 69.672 2.60e-114 325
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev10g0541 K02937 - tcc:18590033 323.168