Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev10g0537 ATGATTTGTTCATCTTCGTTTTCCATTCTTTCCGTTTTCGTCTTGCTTACTGTTATTCTACCTAGGGTTTTTGGTTTCTCCATTTATAATTTCTATCACCGTCTATTTCGTTTCATTGTTTTTATTCTTTCATCGAGAAAGCTTCATGCTTCTCCCTTCCATGATGCTCGCCAGGGTTGTTCCCGTCATGATTATGTTCAGGGAAAGGGAATCAAGCTTGGTATATATTCTGATGCTGGGTTAAATGCACTGCAAACTCCACTTGTGTTTATCGCTGATATCACTGAATTCTCTGTTGCAAAGCTTCGTCTGCTACAAGTTACTTTGGGAAGAGCTGAGAGCCGTAAGCTCATCTACAACAGGGCTAAGCAGTATTCCAAGGAGTACCAGGAGCAGGAAAGGGAACTGATCCAGTTGAAGCGTGAGGCAAAGCTGAAGGGTGGATTTTATGTTGATCCTGAGGCTAAGCTCTTGTTTATTATCCGCATTCATGGTATTAATTCCATGCACCCCAAGACAAGGAAAATCTTGCAGCTGTTGCGGTTGAGACAGATCTTCAACGGTGTGTTCCTTAAGGTTAACAAGGCTACAATGAACATGCTTCACAGAGTTGAGCCCTATGTGACTTATGGATACCCTAATCTTAAGAGTGTCAAAGAACTCATCTACAAAAGGGGTTATGGTAAGCTGGACAAGCAGAGAATTGCCCTCACTGACAACTCCATTATTGAGCAGGTGACACTTCAGGCATTGGGCAAGTTTGGAATCATCTCCATTGAAGATCTTATCCATGAGATCATTACTGTTGGACCCCATTTTAAGGAAGCAAACAACTTCCTTTGGCCTTTTAAGCTGAAGGCTCCATTGGGTGGCTTAAAGAAGAAGAGGAACCACTATGTCGAAGGAGGGGATGCTGGAAACAGGGAGAACTACATCAATGAGCTAATCAGGAGAATGAATTAG 963 0.4247 MICSSSFSILSVFVLLTVILPRVFGFSIYNFYHRLFRFIVFILSSRKLHASPFHDARQGCSRHDYVQGKGIKLGIYSDAGLNALQTPLVFIADITEFSVAKLRLLQVTLGRAESRKLIYNRAKQYSKEYQEQERELIQLKREAKLKGGFYVDPEAKLLFIIRIHGINSMHPKTRKILQLLRLRQIFNGVFLKVNKATMNMLHRVEPYVTYGYPNLKSVKELIYKRGYGKLDKQRIALTDNSIIEQVTLQALGKFGIISIEDLIHEIITVGPHFKEANNFLWPFKLKAPLGGLKKKRNHYVEGGDAGNRENYINELIRRMN* 321
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev10g0537 320 Gene3D - 263 320 IPR036919 -
Aev10g0537 320 Gene3D - 157 262 IPR036919 -
Aev10g0537 320 PANTHER 60S RIBOSOMAL PROTEIN L7-RELATED 111 320 - -
Aev10g0537 320 Pfam Ribosomal protein L30p/L7e 158 208 IPR016082 -
Aev10g0537 320 ProSitePatterns Ribosomal protein L30 signature. 176 208 IPR018038 -
Aev10g0537 320 Pfam Ribosomal L30 N-terminal domain 111 153 IPR012988 -
Aev10g0537 320 SUPERFAMILY Ribosomal protein L30p/L7e 157 320 IPR036919 -
Aev10g0537 320 CDD Ribosomal_L7_archeal_euk 157 320 IPR035808 -
Aev10g0537 320 TIGRFAM uL30_euk: 60S ribosomal protein uL30 109 320 IPR005998 GO:0000463|GO:0003735|GO:0022625
Aev10g0537 320 PANTHER 60S RIBOSOMAL PROTEIN L7 111 320 IPR039699 -
Aev10g0537 320 Coils Coil 115 146 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev10g0537 Aev-Chr10 5878451 5884788 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev10g0537 96 320 Cytoplasmic Ribosomal Protein Gene Family AT3G13580 81.416 7.39e-133 376
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev10g0537 K02937 - tcc:18590033 367.081