Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev10g0529 ATGTGTGTGCGTGCGCAGTCTGTGCTGAAGAAGAGGAAGAGAGAGGAGGAGTGGGCTTTGGCCAAGAAGCAGGAGCTTGATGCTGCCAAGAAGAAGAGAGCTGAGAGCCGTAAGCTCATCTACAACAGGGCTAAGCAGTATTCCAAGGAGTACCAGGAGCAGGAAAGGGAACTGATCCAGTTGAAGCGTGAGGTAAAGCTGAAGGGTGGATTTTATGTTGATCCTGAGGCTAAGCTCTTGTTTATTATCCGCATTCGTGGTATTAATGCCATGCACCCCAAGACAAGGAAAATCTTGCAGCTGTTGCGGTTGAGACAGATCTTCAACGGTGTGTTCCTTAAGGTTAACAAGGCTACAATGAACATGCTTCACAGAGTTGAGCCCTATGTGACTTATGGATACCCTAATCTTAAGAGTGTCAAAGAACTCATCTACAAGAGGGGTTACGGTAAGCTGGACAAGCAGAGAATTGCCCTCACTGACAACTCCATTATTGAGCAGGTATTGGGCAAGTTTGGAATCATCTCCATTGAAGATCTTATCCATGAGATCATTACTGTTGGACCCCATTTTAAGGAAGCAAACAACTTCCTTTGGCCTTTTAAGCTGAAAGCTCCATTGGGTGGCTTAAAGAAGAAGAGGAACCACTATGTCGAAGGAGGGGATGCTGGAAATAGGGAGAACTACATCAATGAGCTAATCAGGAGAATGAATTAG 717 0.4547 MCVRAQSVLKKRKREEEWALAKKQELDAAKKKRAESRKLIYNRAKQYSKEYQEQERELIQLKREVKLKGGFYVDPEAKLLFIIRIRGINAMHPKTRKILQLLRLRQIFNGVFLKVNKATMNMLHRVEPYVTYGYPNLKSVKELIYKRGYGKLDKQRIALTDNSIIEQVLGKFGIISIEDLIHEIITVGPHFKEANNFLWPFKLKAPLGGLKKKRNHYVEGGDAGNRENYINELIRRMN* 239
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev10g0529 238 Gene3D - 183 238 IPR036919 -
Aev10g0529 238 Gene3D - 79 182 IPR036919 -
Aev10g0529 238 ProSitePatterns Ribosomal protein L30 signature. 98 130 IPR018038 -
Aev10g0529 238 CDD Ribosomal_L7_archeal_euk 79 238 IPR035808 -
Aev10g0529 238 SUPERFAMILY Ribosomal protein L30p/L7e 79 238 IPR036919 -
Aev10g0529 238 Pfam Ribosomal L30 N-terminal domain 7 75 IPR012988 -
Aev10g0529 238 PANTHER 60S RIBOSOMAL PROTEIN L7 5 238 IPR039699 -
Aev10g0529 238 PANTHER 60S RIBOSOMAL PROTEIN L7 5 238 - -
Aev10g0529 238 TIGRFAM uL30_euk: 60S ribosomal protein uL30 6 238 IPR005998 GO:0000463|GO:0003735|GO:0022625
Aev10g0529 238 Coils Coil 37 64 - -
Aev10g0529 238 Pfam Ribosomal protein L30p/L7e 80 130 IPR016082 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev10g0529 Aev-Chr10 5782512 5788801 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev10g0529 2 238 Cytoplasmic Ribosomal Protein Gene Family AT3G13580 86.920 2.42e-153 424
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev10g0529 K02937 - tcc:18590033 415.616