Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev10g0501 ATGACGCCATCTCACTCACAAGGTGAGGATCCCATCTCTTCTCATCCTCACAGTAGACAACCGCGCCGCTCTCTGTCCTCTGGTCTGTTCCTCTCTCTGCTGTGCTCACCGGCGGCACCGCTCAGCCTCTCTGCAGTGAGGCAGTCACCCACGCCACCACCCGCGCCGCCCTCACCTCCCTCGGCCTTCATCGCACCGGCTCGCCCTCGCCTTCCTCGGCCTAGCTTCGTCGTGCCGGCTTCGCCTTCACCTCCTTCAGGTTCGTCTCGTCATCGCCTCCCTCGAGCCTTCATCTCTCTCGGCCTCGTGCTCCCTCCGTCAGCCCTGTCCCCAAGAATGGCCAACGCGGAAGTGAAAGCGGTGGTTCCCGAATCAGTGTTGAAGAAGCAGAAGAGGAGTGAGGAGTGGGCTCTTGCGAAAACCCAGGAGCTTGAGGCCGCGAAGAAGAAGAGGGTCGAAACGCGGAAATTGATCTTCAACAGGGCCAAACAGTACGCAAAGGAATACGATGAGCAGGACAAGGAGTTGATTAGGTTGAAGCGTGAAGCCAAGCTTAAGGGCGGGTTTTATGTCGACCCTGAAGCTAAGCTCTTGTTCATCATCAGGATCCGTGGTATCAATGCCATTGACCCAAAAACAAGGAAGATTTTGCAGCTTCTGCGTTTGAGACAGATCTTCAATGGTGTCTTTCTCAAGGTTAACAAAGCAACCATTAATATGCTTCACAGGGTGGAGCCTTATGTCACCTATGGGTACCCTAACTTGAAGAGTGTAAAAGAACTTATTTACAAGAGAGGCTTTGGAAAAGTTGATAAGCAGAGAATTCCTTTGACAGACAACTCTATTATCGAACAGACTTTGGGGAAGCATGGAATTATTTGCGTTGAAGATCTGATCCACGAGATTTTGACTGTTGGACCTCACTTCAAGGAGGCAAACAACTTTCTGTGGCCATTCAAGCTCAAGGCTCCCCTTGGTGGTCTGAAGAAGAAGAGGAACCATTATGTTGAAGGTGGTGATGCTGGCAACAGGGAAGGTTACATTAATGAGCTCATTAGAAGAATGAATTAA 1071 0.5098 MTPSHSQGEDPISSHPHSRQPRRSLSSGLFLSLLCSPAAPLSLSAVRQSPTPPPAPPSPPSAFIAPARPRLPRPSFVVPASPSPPSGSSRHRLPRAFISLGLVLPPSALSPRMANAEVKAVVPESVLKKQKRSEEWALAKTQELEAAKKKRVETRKLIFNRAKQYAKEYDEQDKELIRLKREAKLKGGFYVDPEAKLLFIIRIRGINAIDPKTRKILQLLRLRQIFNGVFLKVNKATINMLHRVEPYVTYGYPNLKSVKELIYKRGFGKVDKQRIPLTDNSIIEQTLGKHGIICVEDLIHEILTVGPHFKEANNFLWPFKLKAPLGGLKKKRNHYVEGGDAGNREGYINELIRRMN* 357
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev10g0501 356 Gene3D - 303 356 IPR036919 -
Aev10g0501 356 Gene3D - 197 302 IPR036919 -
Aev10g0501 356 Coils Coil 162 182 - -
Aev10g0501 356 Pfam Ribosomal protein L30p/L7e 198 248 IPR016082 -
Aev10g0501 356 TIGRFAM uL30_euk: 60S ribosomal protein uL30 123 356 IPR005998 GO:0000463|GO:0003735|GO:0022625
Aev10g0501 356 MobiDBLite consensus disorder prediction 47 68 - -
Aev10g0501 356 MobiDBLite consensus disorder prediction 44 68 - -
Aev10g0501 356 CDD Ribosomal_L7_archeal_euk 197 356 IPR035808 -
Aev10g0501 356 PANTHER 60S RIBOSOMAL PROTEIN L7-RELATED 101 356 - -
Aev10g0501 356 Pfam Ribosomal L30 N-terminal domain 122 193 IPR012988 -
Aev10g0501 356 MobiDBLite consensus disorder prediction 1 24 - -
Aev10g0501 356 ProSitePatterns Ribosomal protein L30 signature. 216 248 IPR018038 -
Aev10g0501 356 SUPERFAMILY Ribosomal protein L30p/L7e 197 356 IPR036919 -
Aev10g0501 356 PANTHER 60S RIBOSOMAL PROTEIN L7 101 356 IPR039699 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev10g0501 Aev-Chr10 5422129 5427617 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev10g0501 113 356 Cytoplasmic Ribosomal Protein Gene Family AT3G13580 86.475 3.77e-159 444
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev10g0501 K02937 - gmx:100500011 427.943