Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev10g0494 ATGGAACTTGGTTTGAGCTTAGGAGACTCTTCAAGGCCTTTTGTTGGGTTCATGGAAAAGCCTAATCCTGAAGCTTCTTCCAATCGACACCAACTAATTGGGTTCGGCTTCAACACAACCTTATCAATTGGTCCAATCATCAATAGTACTAGACAAATTAGAGATCAACAAGAACAAGAACGGCAAGAACAAGAAAAAGAAAAAGAAGCAAAGGGAAACAGGGTCGTTAACAACCCTGTTCTGCATCAGCTTGATTTCCTTCCTCAACTCTCTCTCCCATGGCCTCCTTCTCAAAACGGTAGTTTCTCAGGGGAGTTGGGGGATTCTTCAAAAGGGTTGGATGTGAACGTGCAACCGTTGACGGCGGCGGAGGAAGGGACGGTGCTATCGTCGTCACCCAACAGCGCAGCATCGTCTTTTCAGATGGATCTATACATGTTCAGAGGAGGTGGTGATGGTGGAAGTTTCAGTGGTTCAGGTGGAGGAGGGAACTATTACAATAACTATAGTGGTGGAAAAAGAGATTCAGATGATGGTGAAGGTTATGATCATCACCAAAGGGATTCTTCAAGAGCAAGCGATGAAGATGATAACGGCGGCGACGGCAGCGGCAGCGGCGGAACAAGGAAGAAGCTCAGGCTCTCCAAGGACCAATCTGCTTACCTTGAAGAGAGCTTCAAGGAACACAACACCCTTAATCCTAAACAAAAGCTTGCTCTTGCTAAGCAACTCAATCTTCGGCCCCGCCAAGTAGAAGTCTGGTTTCAAAACAGACGAGCAAGGACAAAGTTGAAGCAAACAGAGGTGGATTGTGAGTACTTGAAGAGGTGCTGTGAGACATTAACTGAAGAGAATAGGAGGCTTCACAAGGAGCTTCAAGAATTGAGGGCCCTAAAGACTTCAAACCCATTTTACATGCAGTTACCAGCAACAACCTTAACCATGTGCCCTTCATGTGAGAGAGTTGCAACAAATTCAAATTCAAATTCCCCTACTATTACTTCCTCTTCAGCAGCAGCATCAACGACAACTACAACTCCTTCCAACACTGCAAAAAGTATTATTAATGATAATGACTCAATTACCCCTAAAGCCAATATTGGTTTATTCCCACTTGAGAAACCAAGGTTTCATCCCTTTGCTCACACAGCCACCACAACACCTCAGCATACAAATCAGTTCACAAGAGCACCTTGA 1197 0.4486 MELGLSLGDSSRPFVGFMEKPNPEASSNRHQLIGFGFNTTLSIGPIINSTRQIRDQQEQERQEQEKEKEAKGNRVVNNPVLHQLDFLPQLSLPWPPSQNGSFSGELGDSSKGLDVNVQPLTAAEEGTVLSSSPNSAASSFQMDLYMFRGGGDGGSFSGSGGGGNYYNNYSGGKRDSDDGEGYDHHQRDSSRASDEDDNGGDGSGSGGTRKKLRLSKDQSAYLEESFKEHNTLNPKQKLALAKQLNLRPRQVEVWFQNRRARTKLKQTEVDCEYLKRCCETLTEENRRLHKELQELRALKTSNPFYMQLPATTLTMCPSCERVATNSNSNSPTITSSSAAASTTTTTPSNTAKSIINDNDSITPKANIGLFPLEKPRFHPFAHTATTTPQHTNQFTRAP* 399
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev10g0494 398 ProSitePatterns 'Homeobox' domain signature. 240 263 IPR017970 GO:0000981|GO:0006355
Aev10g0494 398 SMART HOX_1 207 269 IPR001356 GO:0003677
Aev10g0494 398 PANTHER - 1 349 - -
Aev10g0494 398 SMART halz 265 308 IPR003106 GO:0006355|GO:0043565
Aev10g0494 398 Pfam Homeobox associated leucine zipper 265 299 IPR003106 GO:0006355|GO:0043565
Aev10g0494 398 MobiDBLite consensus disorder prediction 169 213 - -
Aev10g0494 398 CDD homeodomain 209 266 IPR001356 GO:0003677
Aev10g0494 398 PANTHER HOMEOBOX-LEUCINE ZIPPER PROTEIN HAT14 1 349 - -
Aev10g0494 398 Coils Coil 47 74 - -
Aev10g0494 398 MobiDBLite consensus disorder prediction 173 198 - -
Aev10g0494 398 MobiDBLite consensus disorder prediction 51 75 - -
Aev10g0494 398 Gene3D - 201 270 - -
Aev10g0494 398 CDD bZIP 258 297 - -
Aev10g0494 398 MobiDBLite consensus disorder prediction 324 358 - -
Aev10g0494 398 Coils Coil 278 301 - -
Aev10g0494 398 Pfam Homeodomain 209 263 IPR001356 GO:0003677
Aev10g0494 398 MobiDBLite consensus disorder prediction 54 73 - -
Aev10g0494 398 ProSiteProfiles 'Homeobox' domain profile. 205 265 IPR001356 GO:0003677
Aev10g0494 398 SUPERFAMILY Homeodomain-like 191 266 IPR009057 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev10g0494 Aev-Chr10 5278407 5281673 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev10g0494 111 329 Homeobox Transcription Factor Family AT5G47370 57.727 1.46e-66 211
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-HD-ZIP Aev10g0494 Homeodomain 2.6e-15 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev10g0494 K09338 - gmx:100805312 392.889