Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev10g0456 ATGGGAAGACCAAGGTGCTTCTTCGACATTAGCATCGGAGAAGAGGTTGAAGGAAGGATCGTGGTTGAGCTCTTCGATGACATTGTCCCTAAAACTGCTGAGAACTTCAGGGCTCTCTGTACTGGCCTTAAGGGCACTGGTCCTAACACTGGGGTACCCCTCCATTACAAGGGTTCTTGCTTTCACCGTGTTATTAAAGGCTTTATGATTCAAGGTGGTGATATATCTGCTGGAGATGGTACTGGAGGAGAATCTATATATGGACTGAAGTTTGAGGATGAAAATTTTGAGATGAAACATGAAAGGAAAGGGATGTTATCGATGGCCAATTGTGGTCCAAATACAAATAGCTCTCAGTTTTTTATCACAACGACCCGAACTCCTCATCTAGATGGTAAGCATGTTGTATTTGGGAGAGTACTTAAAGGAATGGGAGTGGTTCGTTCAATCGAGCACGTCACAACTGGAGAACAAGACCGTCCTGTATTTGATGTTAAAATCGCAGATTGTGGGGAAATTCCTGAAGGAGAAGATAATGGAATATATAACTTTTTCAAGGATGGTGATACTTATCCTGATTGGCCAGCAGACCTGGATGAGAGACCCGATGAACTTGAGTGGTGGATGAATGCTGTAGACTCCATTAAAACTTATGGAAATGGGTATTACAAGAAACAAGACTACAAAATGGCTCAAAGGAAGTATCGGAAGGCTTTGCGCTACCTGGATATTTGTTGGGAGCAAGAAGGGATTGATGGAGAAAAAAGCGCAGCTTTGAGGAAAACTAAGTCTCAGATTTTTACAAACAGCTCTGCTTGTAAATTGAAATTAGGAGACCTCAAAGGAGCATTATTTGATGCAGAGTTTGCATTGCGTGAAGAAGACAACAATGTCAAAGCTTTATTCAGGCAAGGACAGGCACACATGGCACTCCATGACATTGATGCTGCAGTTGAAAGCTTTAAAAATGCACTGATCTTAGAGCCAAACGATGCTGGGATTAAAAAGGAACTTGCTGCTGCTAGGAAGAAGATTGCTGATAGACGTGATCAGGAGAAAAAGGCATATAGCAAGATGTTTCAGATTATGGGGATTAGAGTGGAAGAATTCTTAGAGAAAGATGTGAAAAAGAGAGTGGAGATTGATATGATGGAAGTTATAAAAGGCTCATCTTCGTCAGGGTAA 1185 0.4169 MGRPRCFFDISIGEEVEGRIVVELFDDIVPKTAENFRALCTGLKGTGPNTGVPLHYKGSCFHRVIKGFMIQGGDISAGDGTGGESIYGLKFEDENFEMKHERKGMLSMANCGPNTNSSQFFITTTRTPHLDGKHVVFGRVLKGMGVVRSIEHVTTGEQDRPVFDVKIADCGEIPEGEDNGIYNFFKDGDTYPDWPADLDERPDELEWWMNAVDSIKTYGNGYYKKQDYKMAQRKYRKALRYLDICWEQEGIDGEKSAALRKTKSQIFTNSSACKLKLGDLKGALFDAEFALREEDNNVKALFRQGQAHMALHDIDAAVESFKNALILEPNDAGIKKELAAARKKIADRRDQEKKAYSKMFQIMGIRVEEFLEKDVKKRVEIDMMEVIKGSSSSG* 395
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev10g0456 394 CDD cyclophilin_ABH_like 4 171 - -
Aev10g0456 394 ProSiteProfiles TPR repeat profile. 298 331 IPR019734 GO:0005515
Aev10g0456 394 PANTHER PEPTIDYL-PROLYL CIS-TRANS ISOMERASE CYP40 1 361 - -
Aev10g0456 394 ProSiteProfiles Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain profile. 7 172 IPR002130 GO:0000413|GO:0003755
Aev10g0456 394 Gene3D - 1 179 IPR029000 -
Aev10g0456 394 Gene3D Tetratricopeptide repeat domain 206 362 IPR011990 GO:0005515
Aev10g0456 394 SUPERFAMILY Cyclophilin-like 3 174 IPR029000 -
Aev10g0456 394 ProSitePatterns Cyclophilin-type peptidyl-prolyl cis-trans isomerase signature. 56 73 IPR020892 GO:0003755|GO:0006457
Aev10g0456 394 Pfam Tetratricopeptide repeat 299 331 IPR013105 -
Aev10g0456 394 PANTHER PEPTIDYL-PROLYL CIS-TRANS ISOMERASE 1 361 - -
Aev10g0456 394 SMART tpr_5 264 297 IPR019734 GO:0005515
Aev10g0456 394 SMART tpr_5 298 331 IPR019734 GO:0005515
Aev10g0456 394 SMART tpr_5 212 245 IPR019734 GO:0005515
Aev10g0456 394 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 119 131 IPR002130 GO:0000413|GO:0003755
Aev10g0456 394 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 61 73 IPR002130 GO:0000413|GO:0003755
Aev10g0456 394 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 132 147 IPR002130 GO:0000413|GO:0003755
Aev10g0456 394 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 104 119 IPR002130 GO:0000413|GO:0003755
Aev10g0456 394 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 24 39 IPR002130 GO:0000413|GO:0003755
Aev10g0456 394 SUPERFAMILY TPR-like 207 359 IPR011990 GO:0005515
Aev10g0456 394 Pfam Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD 8 171 IPR002130 GO:0000413|GO:0003755
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev10g0456 Aev-Chr10 4787877 4792109 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev10g0456 14 170 U-box Gene Family AT5G67530 43.038 5.79e-33 128
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev10g0456 K05864 - gmx:100813496 632.869