Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev10g0382 ATGGGACGCGGAAAGATTGAGATCAAGAGGATAGAGAACACGACGACGAGGCAAGTGACTTTCTCGAAGCGAAGGAGTGGATTGATGAAGAAGACGAAGGAGCTTGCTGTGCTTTGTGATGCTCAGATCGGACTCATCATATTCTCCAGCACTGGCAAGAAGTTTGAGTATTGTAGTGAATCCTTGAGGATGGAGCAAATCATTGAAAAGTACCAGCGAGCTACAGGAACTCGCATAATAGAACATGATCACCATAGGGAAGATTTATTGAATGACATTGCAATGCTGAGGCGTGAAACTCTGAGCCTTGAGCTTGGAATTCAGCGGTACCTTGGGGAGGGCACAGGCTGTCTACAATATGAAGACTTAACTAAGCTTGAAGAAGAATTAGAAAACTCTGTTGCTAAGGTTCGAAACCGCCAGAATGAGCTCTTACAACAGCAGATGGAGAATCTGCGAAGGAAGGAAAGAATCTTGGAAGATGAAAACTGCAATTTGTCCACTTGGGAGCAGAGGGCAGTGTTGGAGTTTCAGAAGGCGGCAGCGGTGGTGGAAGCAAGTAAGCCGGCGGCAGGAGCGGCGGTGCAGCAGCAAGAAGAAGTAATGGATCATCAGTTCTCATTCTTTGATGAGCAGCCTTCAGGCTCAGGCAGCATCCTTCAACTAGGTGCACCTCATCATGTCCTTCCTCAACTTCACCCATATCTCCAGCTGGCGCAGCCCAATATTCACCACTCCTTCACCGTCCCTGACCTATACAAAAATATTCATGAGTAA 777 0.4723 MGRGKIEIKRIENTTTRQVTFSKRRSGLMKKTKELAVLCDAQIGLIIFSSTGKKFEYCSESLRMEQIIEKYQRATGTRIIEHDHHREDLLNDIAMLRRETLSLELGIQRYLGEGTGCLQYEDLTKLEEELENSVAKVRNRQNELLQQQMENLRRKERILEDENCNLSTWEQRAVLEFQKAAAVVEASKPAAGAAVQQQEEVMDHQFSFFDEQPSGSGSILQLGAPHHVLPQLHPYLQLAQPNIHHSFTVPDLYKNIHE* 259
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev10g0382 258 PRINTS MADS domain signature 23 38 IPR002100 GO:0003677|GO:0046983
Aev10g0382 258 PRINTS MADS domain signature 3 23 IPR002100 GO:0003677|GO:0046983
Aev10g0382 258 PRINTS MADS domain signature 38 59 IPR002100 GO:0003677|GO:0046983
Aev10g0382 258 Coils Coil 120 172 - -
Aev10g0382 258 Gene3D - 14 94 IPR036879 GO:0003677|GO:0046983
Aev10g0382 258 PANTHER SERUM RESPONSE FACTOR HOMOLOG 1 244 - -
Aev10g0382 258 Pfam SRF-type transcription factor (DNA-binding and dimerisation domain) 10 57 IPR002100 GO:0003677|GO:0046983
Aev10g0382 258 ProSiteProfiles MADS-box domain profile. 1 61 IPR002100 GO:0003677|GO:0046983
Aev10g0382 258 SMART madsneu2 1 60 IPR002100 GO:0003677|GO:0046983
Aev10g0382 258 CDD MADS_MEF2_like 2 76 IPR033896 GO:0000977|GO:0045944
Aev10g0382 258 SUPERFAMILY SRF-like 2 91 IPR036879 GO:0003677|GO:0046983
Aev10g0382 258 PANTHER PROTEIN TRANSPARENT TESTA 16-LIKE ISOFORM X1 1 244 - -
Aev10g0382 258 Pfam K-box region 82 167 IPR002487 GO:0003700|GO:0005634|GO:0006355
Aev10g0382 258 ProSiteProfiles K-box domain profile. 86 180 IPR002487 GO:0003700|GO:0005634|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev10g0382 Aev-Chr10 4057655 4063623 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev10g0382 1 249 MADS-box Gene Family AT5G23260 46.875 6.96e-66 204
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MADS-MIKC Aev10g0382 K-box 4.8e-17 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev10g0382 - - adu:107471830 304.679