Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev10g0364 ATGGAAGAGGAAGATGAAGAGGAAGTGGTTTCTTCTTCTTCTTCCGGCGAGGAATACGAAGAAGATTGTTTATCTCCCCCCCACCACGACCAACGAAAATCGCACAATGTAGATGCTCTCCTCAGGGGCAACCTCATCGTGAAGAGACAATCACTTCTACCGCGAGTTCTATCAGTAGGAACTGGTGCATGTAGAAATCCCTTCAAACCTCCATCCTCCAATCGCAGACACAGTTACGGGAATGATGAGCTTACTCGTCGTCTCTCCGCTCGTAAAAAGTTTGTCCCATGGCGCTCTTCCAGTTGCATCCCCCGAACCCCCCTCTTGGACTTGGACTTGAACGCCGATTCCCACGATGAAGCCGAAGTAGAAGTTCCTCTCCCTCCTGGGATAGACCCTCTGATACTGTGGCTCCCTCCCAACTCCGAGGAGTATGAGCATCCACCTTCCAATTTCACCGCAATCGCAGTTGATCCACTGCTTGTTCGTTTCCTTCGTCCACATCAGAGAGAAGGAGTTCAGTTCATGTTTGATTGTGTCTCAGGGCTATGCAGTGCAGAAAATATACATGGATGCATTCTGGCAGATGATATGGGTTTGGGGAAGACATTACAGTCGATTACATTACTGTATACTCTAATTTGTCAAGGCTTTGATGGGAAGCCAATGGTTAGAAAGGCCATCATAGTGACTCCTACCAGCCTTGTCAGTAATTGGGAAGCCGAAATCAAGAAGTGGGTTGGAGAAAGAGTTCATCTTCTTGCTTTATGTGAAAGCAGTAGAGAAGATGCTATCTCTGGCATTGACAATTTTACTAGTCCCCGCAGCACTTTACAGGTGCTCATTGTTTCATATGAGACATTCCGGTTGCATTCATCGAAGTTTAGCTGTAGTGAATCTTGTGACCTTCTTATTTGTGATGAGGCTCACAGACTGAAAAATGACCAGACAATAACTAACCGGGCATTGGCTGCTCTCCCATGCAAACGTAGAGTTTTGTTGTCAGGAACTCCCTTGCAGAATGACTTAGAGGAATTCTTCGCGATGGTTAACTTTACTAATCCTGGAATATTGGGTAATATTGCCAATTTTCGACGTTACTATGAGGCTCCAATTGTTTGCGGAAGAGAACCTAATGCTACTGCAGAAGAGAAGAAGCTAGGTCTTGAACGCTCGGCAGAATTAAGTGCCAAAGTGAATCGGTTCATATTAAGAAGGACTAATGCGTTATTATCAAATCACTTGCCACCAAAGATAGTTGAAGTTGTTTGCTGCAAGTTGACTCCACTACAGTCAGACCTATATAAACATTTCATACAATCCAAGAATGTTAGACGTGTAATTCATGAAGAACAGAAGCAATCGAAGATCTTGGCCTACATAACTGCTCTCAAAAAGTTGTGCAATCATCCAAAGCTTATCTACGATACCATAAGAAGTGGGAGTCCAGGAACTTCAGGCTTTGAAGATTGCCTTCGATTCTTCCCTCCAGAAATGCTGTCTGGAAGGTCTGGCTTATGGGCAGGAGGGCATGGAGCTTGGGTTGAGCTGTCCGGTAAAATGCATGTCTTAGCAAGATTACTTGCTCATTTACGTCAGAGGACAAATGATCGCATTGTCCTTGTCTCAAATTACACTCAGACTCTCGATCTTTTTGCTCAATTGTGTCGGGAACGAAGGTACCCTTACCTGAGGCTTGATGGTGCTACATCAATCAGAAAAAGGCAGAAGTTGGTCAACTCCTTTAATGATCCATCTAAGGACGAATTTGTTTTTCTCTTAAGCAGCAAGGCTGGTGGCTGTGGACTCAATTTGATTGGTGGAAATCGACTTGTCTTGTTTGATCCTGATTGGAACCCAGCAAATGATAAACAAGCTGCTGCGAGAGTGTGGAGGGATGGACAGAAGAAAAGAGTATATATTTATAGATTTTTGAGTGCTGGAACAATAGAAGAAAAGGTCTACCAGCGTCAGATGTCAAAAGAAGGGCTGCAAAAGGTCATTCAGCAGGAGCAGTCAGAAAGCCTTGTGGCACAGGGGAACTTTCTTTCAACAGAGGATCTTCGTGATTTGTTCTCTTTTCATGAGAACATCAAGTCAGAGATTCATGAAAAGATGCAATGCACTCGGTGCCAAACATATGATGGACCTCAAAGCACTGATGACAAATATACTGCTCAATCGGCGGTAGTTGATAGTGAATTTGATGAAGAAGTCTCTGATATAGGTGGATTTGCAGAAATTGCAGGCTGCTTAGAGAAGTTAAAAAGATCAGAAAAGCAGGTAGGGTCGCCATTGGAAGAAGATCTAGGCCGTTGGGGTCATCATTTTTTTCCAACTTCTGTTCCGGATACTATCCTTCAGGCTTCAGCTGGTGATGAGGTGAGCTTTGTGTTCACAAATCAAGTTAATGGAAAGCTGGTCCCCATAGAGTCCACAATCAGTCCCGAAACAACACATCAAGAGGAAGCGCAAACTGTTTTAGCCAAGTCAAAGCTGCAGCACATCAAACGAAAGCCCGCTATTTTTTCTAATCAGCCACTGCGATCTCATGCTACGGGTGTCGCTTATACATCATCTTCCTCTTCCAATGCTTCTATAAAGGAATCACTTCATTTTGTCGGAAGAAGCAAACAAATTTCAAGGAATGTAGCATTTAAGTCCGATTGCTACACTCGGCGCCTCTTCCTCATTTTTCTCTCAATTCACAATTTCACATACCCAGCCACAGCCGCCACCCACGTCAACCCTCTCGCGGCCTCGCCTCCTCTTGCTACTGTTCCTGTCACGCCTGGCCGCTTGGCGCCGCGTCTCTCCTTCCTGCTCCGGTTCCATCGTGCCTCTGCCTTCCGTCGCCCATCAGCATCCGCCGCCCATCAGAATCCGCCGCGCAGCCACTGTGCCCTCTGGCCACTCACACAAACACAACTCTACTCAAGCACAGCGCAACCGGCGCCGCCAGTGACAGAAGTGCGAACGACACGGTCATCAGTTGTTAGAGGAGACAAACTATGTTACACTCAAAATGTGTCGGAAAAGCGCTTTGAAGTTGTCGCCCCTGCTCCGAAGCTGTGCGCGGAATTCCTCTGTCTTGCAAGCCAAGCAATGTCACGCCCAAACTATTCTCCGAGCATGCATTCATGGAACATCCTGATTGCCTCCTATGTGGCGAGTTTCATGTATTCCGATGCTTTGGATGTTTTCTTCGAGTTCAGGCGCTGCGGTCTTTACCCCGATCATTATACATTGCCCCAACTTTTTAAGGCTTATGTAGGAGTAGGTGATGCTCGTTGTGGTAACATGTGTCATGGTTTGGTGATAAGGCTTGGATATGAGGGGTATGTTGTAGTAGCTAGTTCTGTGCTCGAGTTTTATGTGAAGTGTGGGGCTATGAAGGATGCATGCTTGGTGTTTTCTAGGATGTTGTGTAGAGATTACGTGGCTTGGAATATGATGATTTCGGGGTTGGTAAGGGGTGGGTTGAATTCGAGTGCTATCCGTTATTTCAGAGAGATGCTGCTAATAAATGGGGGAAAGATGGATTACATGTTTGTTCCTAGCATCTTGAATGCTTGTGGGAGGGAAGCAGACTTGATGAAGGGGAAAGAATTACATGGGTATGTGGTGAAGAACTGTGTAAGCCTTGATGAGGATGCTCCCATCGGCAATGCATTGATTGATATGTATGGCAAGTGTGGATGCTTGAATGCTTCGGAGAAGGTTTTCACGATGATGCGCGACGTGAATGTCATCACGTGGACCACCATGATATCTTGTTATGGGGTGCATGGGAAAGGTGAGGAATCCCTCTTGCTGTTTGAGAAGATGATTCGTGACGGGTTTACGCCAAACCCTGTCACACTCACGGCAGCCTTGGCCAGTTGTAGCCACTCTGGTCTGATAGATCAAGGCAAGCACATTTTCAACTCAATTCATTCGGAGTATGGATTTCAGCCGACTGCCGAGCACTATGCCTGTATGGTGGATCTTCTGGGCCGCTTCGGGTATCTTGTTGAAGCACTTCGGATATTGGAGGGCATGAAGTCATCAGCAACTGGAAGCATTTGGGGTGCCCTTCTTGCTGGCTGTGTAATGCACAAGAATGTCGAGATTGGAGAGATTGCAGCACATCATCTTTTCCAATTAGAACCAAAGAATGCTAGCAACTACATAGCCTTATGTGCTATCTATCAATCTCATGGTATGCTTGATGGAATTTCAACTGTTAGAGAAAGAATGAGGGAGTTAGCCGCCGCCACGCTGCTTCGACTCCCGGCGCCACTCTGCTTCGGTCCCGTCGCCGCCTCTGGTTCGAAGCTCGCTGCGGTTTGGTTCGCAGCTCCGCGCCACTGCCGTCACTTCGGTCCAGCTCGCTGCGTTTTGGTTCGCAGCTCCGCTCCGCAGCTCCGCGCCACTCCCCTGCTGTGTTCGAAGCTCGCCGCACCGCCAGTGCTCTGGGTCGAAGCTCGCCGCGCCGCCGCTGCTCTTGGTCGAATACCGCCGCACGCTGCTGCTCTGGGTCGAAACCCTCTAGCCGCTTCTGCTCGCAGTTCCGCATCCAAGTTCAAGACTTCATTCAGCGCTGGCGCGGGCGACACGAGACTTCAGGAAGACGACGACTTGACACGATTTGATGCAAAACGCAATTCGCGTAGGACAGCGATGCGTGTAGGAGTTAGCCGCTTTTGGACGCGGCAGTTGGTGCCAAGGAGAGTGGAGGAGGAAGACGAGCGGCAGCAACACGAGGAGCGGCGACAAGAGCGTTGGCAAGACGAGCGACGGCGACACGGTGTCGACGACAGCACGAGCGCTGTGATGAGCTCCACTAAGGTTCTTCAATCAGCATTAATGATCCCCTTTTAA 4863 0.4787 MEEEDEEEVVSSSSSGEEYEEDCLSPPHHDQRKSHNVDALLRGNLIVKRQSLLPRVLSVGTGACRNPFKPPSSNRRHSYGNDELTRRLSARKKFVPWRSSSCIPRTPLLDLDLNADSHDEAEVEVPLPPGIDPLILWLPPNSEEYEHPPSNFTAIAVDPLLVRFLRPHQREGVQFMFDCVSGLCSAENIHGCILADDMGLGKTLQSITLLYTLICQGFDGKPMVRKAIIVTPTSLVSNWEAEIKKWVGERVHLLALCESSREDAISGIDNFTSPRSTLQVLIVSYETFRLHSSKFSCSESCDLLICDEAHRLKNDQTITNRALAALPCKRRVLLSGTPLQNDLEEFFAMVNFTNPGILGNIANFRRYYEAPIVCGREPNATAEEKKLGLERSAELSAKVNRFILRRTNALLSNHLPPKIVEVVCCKLTPLQSDLYKHFIQSKNVRRVIHEEQKQSKILAYITALKKLCNHPKLIYDTIRSGSPGTSGFEDCLRFFPPEMLSGRSGLWAGGHGAWVELSGKMHVLARLLAHLRQRTNDRIVLVSNYTQTLDLFAQLCRERRYPYLRLDGATSIRKRQKLVNSFNDPSKDEFVFLLSSKAGGCGLNLIGGNRLVLFDPDWNPANDKQAAARVWRDGQKKRVYIYRFLSAGTIEEKVYQRQMSKEGLQKVIQQEQSESLVAQGNFLSTEDLRDLFSFHENIKSEIHEKMQCTRCQTYDGPQSTDDKYTAQSAVVDSEFDEEVSDIGGFAEIAGCLEKLKRSEKQVGSPLEEDLGRWGHHFFPTSVPDTILQASAGDEVSFVFTNQVNGKLVPIESTISPETTHQEEAQTVLAKSKLQHIKRKPAIFSNQPLRSHATGVAYTSSSSSNASIKESLHFVGRSKQISRNVAFKSDCYTRRLFLIFLSIHNFTYPATAATHVNPLAASPPLATVPVTPGRLAPRLSFLLRFHRASAFRRPSASAAHQNPPRSHCALWPLTQTQLYSSTAQPAPPVTEVRTTRSSVVRGDKLCYTQNVSEKRFEVVAPAPKLCAEFLCLASQAMSRPNYSPSMHSWNILIASYVASFMYSDALDVFFEFRRCGLYPDHYTLPQLFKAYVGVGDARCGNMCHGLVIRLGYEGYVVVASSVLEFYVKCGAMKDACLVFSRMLCRDYVAWNMMISGLVRGGLNSSAIRYFREMLLINGGKMDYMFVPSILNACGREADLMKGKELHGYVVKNCVSLDEDAPIGNALIDMYGKCGCLNASEKVFTMMRDVNVITWTTMISCYGVHGKGEESLLLFEKMIRDGFTPNPVTLTAALASCSHSGLIDQGKHIFNSIHSEYGFQPTAEHYACMVDLLGRFGYLVEALRILEGMKSSATGSIWGALLAGCVMHKNVEIGEIAAHHLFQLEPKNASNYIALCAIYQSHGMLDGISTVRERMRELAAATLLRLPAPLCFGPVAASGSKLAAVWFAAPRHCRHFGPARCVLVRSSAPQLRATPLLCSKLAAPPVLWVEARRAAAALGRIPPHAAALGRNPLAASARSSASKFKTSFSAGAGDTRLQEDDDLTRFDAKRNSRRTAMRVGVSRFWTRQLVPRRVEEEDERQQHEERRQERWQDERRRHGVDDSTSAVMSSTKVLQSALMIPF* 1621
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev10g0364 1620 Gene3D Tetratricopeptide repeat domain 1209 1313 IPR011990 GO:0005515
Aev10g0364 1620 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 1249 1283 IPR002885 -
Aev10g0364 1620 Pfam PPR repeat family 1249 1295 IPR002885 -
Aev10g0364 1620 Gene3D - 141 405 IPR038718 -
Aev10g0364 1620 Gene3D - 428 697 - -
Aev10g0364 1620 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 1044 1078 IPR002885 -
Aev10g0364 1620 SMART helicmild6 550 634 IPR001650 -
Aev10g0364 1620 PANTHER DNA EXCISION REPAIR PROTEIN ERCC-6-RELATED 37 840 - -
Aev10g0364 1620 ProSiteProfiles Superfamilies 1 and 2 helicase ATP-binding type-1 domain profile. 183 356 IPR014001 -
Aev10g0364 1620 CDD SF2_C_SNF 517 645 - -
Aev10g0364 1620 ProSiteProfiles Superfamilies 1 and 2 helicase C-terminal domain profile. 523 684 IPR001650 -
Aev10g0364 1620 TIGRFAM PPR: pentatricopeptide repeat domain 1046 1079 IPR002885 -
Aev10g0364 1620 TIGRFAM PPR: pentatricopeptide repeat domain 1251 1284 IPR002885 -
Aev10g0364 1620 Pfam E motif 1366 1415 IPR046848 -
Aev10g0364 1620 Coils Coil 1572 1592 - -
Aev10g0364 1620 Pfam Helicase conserved C-terminal domain 525 633 IPR001650 -
Aev10g0364 1620 Pfam PPR repeat 1047 1076 IPR002885 -
Aev10g0364 1620 Pfam PPR repeat 1147 1173 IPR002885 -
Aev10g0364 1620 Pfam PPR repeat 1223 1247 IPR002885 -
Aev10g0364 1620 Pfam PPR repeat 1324 1349 IPR002885 -
Aev10g0364 1620 CDD DEXHc_RAD54 165 406 - -
Aev10g0364 1620 Gene3D - 406 714 IPR027417 -
Aev10g0364 1620 MobiDBLite consensus disorder prediction 1571 1608 - -
Aev10g0364 1620 Gene3D Tetratricopeptide repeat domain 1314 1423 IPR011990 GO:0005515
Aev10g0364 1620 PANTHER SNF2/RAD54 FAMILY MEMBER 37 840 - -
Aev10g0364 1620 MobiDBLite consensus disorder prediction 1 15 - -
Aev10g0364 1620 SMART ultradead3 161 369 IPR014001 -
Aev10g0364 1620 Gene3D Tetratricopeptide repeat domain 1108 1206 IPR011990 GO:0005515
Aev10g0364 1620 Gene3D Tetratricopeptide repeat domain 1023 1107 IPR011990 GO:0005515
Aev10g0364 1620 MobiDBLite consensus disorder prediction 1571 1600 - -
Aev10g0364 1620 Pfam SNF2-related domain 168 474 IPR000330 GO:0005524|GO:0140658
Aev10g0364 1620 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 142 406 IPR027417 -
Aev10g0364 1620 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 410 800 IPR027417 -
Aev10g0364 1620 MobiDBLite consensus disorder prediction 1 34 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev10g0364 Aev-Chr10 3790488 3815762 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev10g0364 1044 1415 Glycoside Hydrolase AT3G49170 33.957 1.16e-61 226
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR SNF2 Aev10g0364 SNF2_N 1.3e-52 CL0023
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev10g0364 K10875 - gmx:100781631 1347.03