LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Aev10g0361	ATGATACGTGGTCCCCACTCAGCACTCTCCCATCGCAAATTTCATCCGTCCGATAGAAGGCCAATCAAACAGTGTAGGTTCCTCCACGACACCACACATCAGCCTTTGATTAATCAGGTTCTACATGGCTCACGTTCCTCCACGATCATCACTATTTCACCGTCAGATCTTCTTAGATCCAACGGCTACCGTTTTGCAGAGAACCACAGAACGTGGCAGCGGATACAACAAAAACAACTGAAGAAAAGAGAGAGAGAGAGAGTGTGTGTGTTTATGAGTTGGTCCAAGATTTCGGAGGTGGAGATGGATCAAGGTGGTGGAATGGCTCATGAGCTTCTGCGAGTTAGGCAAGCTTCGGAGAGTGGGTCTAAACCCTTAAAGAATTTGAATGGTCAGATCTGTCACATATGTGGTGATGCTGTTGGATTAACAGCCAATGGTGATGTCTTTGTTGCTTGCCATGAGTGTGCTTTCCCACTTTGTCTTCGATGTTTTGAATATGAGTGGAAAAATGGGAACCAATCTTGCCCCCAGTGCAAGACTACATACAAAAGCCACAAAGGGAGTTCTTGTGTAGAGGGAGACGATGACGAGGATGATCTTGATGATCTTGAGAATGAGGTCAATTATGATCAAGGAAATAACACCAATGCAGGACTGCAATGGGACGAAGATGCTGACCTCTCTTCATCATCTGGACATGATTCTCGAATACAAAATCCTCATATCGCAAATGGGAAGCCGATGTCTAGTGAAATACCATGTGCTACTCCTGATACTCAATCTGTGCAAGCTACATCAGGTCCTCCAGGTCCATCCAAAAAGGTTCACTCACTTCCCTACACTGATCCGAAGCAGCCAGGTCTTGAGAGTGATGAGGAGATCAGAAGAGTGCCAGAGATTGGAGGTGAATCTGCTGGAACTTCAGCCTCTCGGCCAGACGCTGGTTCAACTGCTGGACAGGAACGTGCTCAGGGGACAGGGGATGGTCAAAGGAAGAGAGGGAGAAGCCCAGCTGACAAAGAAAGCAAGCGCCTAAAGAGGCTACTGAGGAATAGAGTTTCAGCTCAGCAAGCCAGGGAGAGGAAAAAAGCATATTTGATTGATTTGGAAACAAAAGTCAAAGACTTGGAGAAGAAGAACTCGGAGCTCAAAGAGAAACTTTCCACTTTGCAGAATGAGAACCAAATGCTAAGACAAATATTGAAGAACACAACAGCAAGCAGGAGAGGGAGCAACAGTGGTACCAATGCTGAATGA	1260	0.4619	MIRGPHSALSHRKFHPSDRRPIKQCRFLHDTTHQPLINQVLHGSRSSTIITISPSDLLRSNGYRFAENHRTWQRIQQKQLKKRERERVCVFMSWSKISEVEMDQGGGMAHELLRVRQASESGSKPLKNLNGQICHICGDAVGLTANGDVFVACHECAFPLCLRCFEYEWKNGNQSCPQCKTTYKSHKGSSCVEGDDDEDDLDDLENEVNYDQGNNTNAGLQWDEDADLSSSSGHDSRIQNPHIANGKPMSSEIPCATPDTQSVQATSGPPGPSKKVHSLPYTDPKQPGLESDEEIRRVPEIGGESAGTSASRPDAGSTAGQERAQGTGDGQRKRGRSPADKESKRLKRLLRNRVSAQQARERKKAYLIDLETKVKDLEKKNSELKEKLSTLQNENQMLRQILKNTTASRRGSNSGTNAE*	420

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Aev10g0361	419	Gene3D	Zinc/RING finger domain, C3HC4 (zinc finger)	117	207	IPR013083	-
	Aev10g0361	419	PANTHER	TRANSCRIPTIONAL ACTIVATOR HAC1	260	410	IPR044280	GO:0000981\|GO:0045944
	Aev10g0361	419	SUPERFAMILY	Leucine zipper domain	344	402	IPR046347	GO:0003700\|GO:0006355
	Aev10g0361	419	SUPERFAMILY	RING/U-box	119	206	-	-
	Aev10g0361	419	MobiDBLite	consensus disorder prediction	327	363	-	-
	Aev10g0361	419	PANTHER	TRANSCRIPTIONAL ACTIVATOR HAC1	260	410	-	-
	Aev10g0361	419	MobiDBLite	consensus disorder prediction	182	363	-	-
	Aev10g0361	419	ProSiteProfiles	Basic-leucine zipper (bZIP) domain profile.	342	405	IPR004827	GO:0003700\|GO:0006355
	Aev10g0361	419	CDD	mRING-HC-C4C4_CesA_plant	132	181	-	-
	Aev10g0361	419	ProSitePatterns	Basic-leucine zipper (bZIP) domain signature.	347	362	IPR004827	GO:0003700\|GO:0006355
	Aev10g0361	419	CDD	bZIP_HY5-like	345	396	-	-
	Aev10g0361	419	Pfam	bZIP transcription factor	341	402	IPR004827	GO:0003700\|GO:0006355
	Aev10g0361	419	Pfam	Zinc-binding RING-finger	124	200	IPR027934	-
	Aev10g0361	419	Coils	Coil	339	408	-	-
	Aev10g0361	419	Gene3D	Single helix bin	363	404	-	-
	Aev10g0361	419	MobiDBLite	consensus disorder prediction	208	246	-	-
	Aev10g0361	419	MobiDBLite	consensus disorder prediction	254	271	-	-
	Aev10g0361	419	MobiDBLite	consensus disorder prediction	310	325	-	-
	Aev10g0361	419	SMART	brlzneu	340	404	IPR004827	GO:0003700\|GO:0006355

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Aev10g0361	Aev-Chr10	3740618	3744953	Dispersed/Transposed

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Aev10g0361	280	401	bZIP Transcription Factor Family	AT5G11260	70.732	2.06e-51	169

Transcription factors information

Select	Regulatory Factors	Family	Gene	Hmm_acc	Hmm_name	E_value	Clan
	TF	bZIP	Aev10g0361		zf-UDP	5.3e-38	CL0229

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Aev10g0361	K10999		-	aprc:113855639	498.434