Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev10g0356 ATGGCTGCTTCATCTTCATCAAATAACAACAATAGTAATTCGTGTGGGCAAGTTGGTGGTGGGGTGAGGGAACAAGACCAGTACATGCCAATAGCGAACGTGATAAGGATAATGCGAAGGATCCTTCCGTCGCACGCAAAGATCTCGGACGACGCGAAAGAGACGATCCAAGAGTGCGTCTCTGAGTACATCAGCTTCATCACTTCTGAAGCCAACGACCGGTGCCAGCGCGAGCAGAGGAAGACCGTCACCGCCGAGGATGTCCTCTGGGCGATGGCCAAGCTCGGCTTCGACGACTACGTCACCCCTCTCTCCCGCTACCTCCACCGCTATCGCCACAACGAGGCCGAACCCCACCAACCGCTCCGCCGCACCGCCGGCATCATGATGCAGCAGCAGCAGCATTCTCTGCCGCCGCCGCCGCTGCCGCCATCGGCTTTCGGATCTACAGGAGGGTTTCAAGGTGGTGGAGGAGTGTTTGACATGATGTCACCACCAAATGCTTCGGCTATGGGAGGAGGGCCGTTCTTTAGGGATGATGATGGCCCTCCCTTTGATCCTTTTGCTCACATCAAACGTGATCGCCTCTGA 591 0.5651 MAASSSSNNNNSNSCGQVGGGVREQDQYMPIANVIRIMRRILPSHAKISDDAKETIQECVSEYISFITSEANDRCQREQRKTVTAEDVLWAMAKLGFDDYVTPLSRYLHRYRHNEAEPHQPLRRTAGIMMQQQQHSLPPPPLPPSAFGSTGGFQGGGGVFDMMSPPNASAMGGGPFFRDDDGPPFDPFAHIKRDRL* 197
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev10g0356 196 SUPERFAMILY Histone-fold 25 135 IPR009072 GO:0046982
Aev10g0356 196 PANTHER CCAAT-BINDING TRANSCRIPTION FACTOR-RELATED 5 127 IPR027113 GO:0001228|GO:0006355|GO:0016602
Aev10g0356 196 Gene3D Histone, subunit A 19 137 IPR009072 GO:0046982
Aev10g0356 196 MobiDBLite consensus disorder prediction 1 20 - -
Aev10g0356 196 PANTHER NUCLEAR TRANSCRIPTION FACTOR Y SUBUNIT B-6 5 127 - -
Aev10g0356 196 MobiDBLite consensus disorder prediction 1 22 - -
Aev10g0356 196 MobiDBLite consensus disorder prediction 172 196 - -
Aev10g0356 196 Pfam Histone-like transcription factor (CBF/NF-Y) and archaeal histone 29 92 IPR003958 -
Aev10g0356 196 PRINTS CCAAT-binding transcription factor subunit A signature 56 74 - -
Aev10g0356 196 PRINTS CCAAT-binding transcription factor subunit A signature 75 93 - -
Aev10g0356 196 PRINTS CCAAT-binding transcription factor subunit A signature 94 112 - -
Aev10g0356 196 ProSitePatterns NF-YB/HAP3 subunit signature. 59 75 IPR003956 GO:0005634|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev10g0356 Aev-Chr10 3699336 3699926 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev10g0356 10 117 CCAAT-HAP3 Transcription Factor Family AT5G47670 76.852 3.63e-58 181
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NF-YB Aev10g0356 CBFD_NFYB_HMF 2.5e-25 CL0012
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev10g0356 K08065 - gmx:100811633 196.052