Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev10g0242 ATGTCTATACAGCATGAAAATTCTGATGTCAATGGTGTATCAGGTTCAAGATCTTGCCTTTATGATCTCTTCTGCACTGAAACACCAAGTTTGAATTCTCAAAGTCAAAGAGACCGATGGTTGTCTTCTGGTCCACATGAAAGGCTAGACAATCTGATGCGTCAAGCTGGGAACAAGTTCTGTGCTGATTGTGGATCAGCAGAACCAAAATGGGTCTCTTCAAGTCTTGGAGTGTTTATCTGCATCAAATGCTCTGGCATACATAGAAGCTTAGGAGTCCATATATCGAAGGTTCTATCACTGAAACTAGATCAATGGACAGATGAAGAAGTAGATGCATTGGTGAAATTGGGTGGAAATACTGTAATAAATAAGAAGTATGAAGCTTGCCTCCCAAGTTACATTAAAAAACCAAAACCACATTCTTCCATTGAGGAGCGCTCGGATTTTATTAGGAGAAAATATGAGCTGCTACAGTTTTTAGATACTGAGGAGAATTTGACATGCCCCTTTGTACCATCTCAAGGAAGAAGTTTATCATCCTGTCAGAGCAGTTCCTCATCCTTCAATTTTCCTCTGGACAAAAGACATTACTTCGAAAAACTACCAACCAAAAGTCGTGTTGGTATTGGCCATGCATTACGAAACAGCTGGGCAAGAAAAGATTCTGAACATAAGATTTCTAAGAGGGGACACTCATTGGCAGGTATGGTTGAATTTGTTGGGTTGATCAAGGTTAATGTGGTTAAAGGTACTAATCTGGCTGTCCGAGATGTAATGACTAGTGACCCTTATGTCATGATTTCTCTTGGTCACCAATCGGTGAAGACACGTGTCATAAAGAACAATTTGAACCCAGTCTGGAATGAAAGCCTAATGCTGTCGATTCCACAGAACATTCCTCCTCTTAAAGTGGTTGTGTACGACAAGGATACTTTCTCGACCGATGATTTTATGGGAGAGGCTGAGATAGACATTCAACCTCTAGTTACAGCCGCAAAGGCGTGCGAGAAATCTTCAATCAATGAGTCAATGCAGCTTGGAAAATGGGTAGCAAGTGGTGACAACACCCTTGTTAAAGATGGTATCATCAACCTTGAAGAAGGGAAGGTCAAGCAAGAAATCCAATTGAGGCTGCAGAATGTTGAGAGAGGTGTGCTGGAGATTCAGCTTGAATGTGTTCCTCTCACTCAATAA 1197 0.4119 MSIQHENSDVNGVSGSRSCLYDLFCTETPSLNSQSQRDRWLSSGPHERLDNLMRQAGNKFCADCGSAEPKWVSSSLGVFICIKCSGIHRSLGVHISKVLSLKLDQWTDEEVDALVKLGGNTVINKKYEACLPSYIKKPKPHSSIEERSDFIRRKYELLQFLDTEENLTCPFVPSQGRSLSSCQSSSSSFNFPLDKRHYFEKLPTKSRVGIGHALRNSWARKDSEHKISKRGHSLAGMVEFVGLIKVNVVKGTNLAVRDVMTSDPYVMISLGHQSVKTRVIKNNLNPVWNESLMLSIPQNIPPLKVVVYDKDTFSTDDFMGEAEIDIQPLVTAAKACEKSSINESMQLGKWVASGDNTLVKDGIINLEEGKVKQEIQLRLQNVERGVLEIQLECVPLTQ* 399
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev10g0242 398 PRINTS HIV Rev interacting protein signature 58 77 IPR001164 GO:0005096
Aev10g0242 398 PRINTS HIV Rev interacting protein signature 98 119 IPR001164 GO:0005096
Aev10g0242 398 PRINTS HIV Rev interacting protein signature 77 94 IPR001164 GO:0005096
Aev10g0242 398 SMART arf_gap_3 47 168 IPR001164 GO:0005096
Aev10g0242 398 ProSiteProfiles C2 domain profile. 221 340 IPR000008 -
Aev10g0242 398 PANTHER CALCIUM-DEPENDENT ARF-TYPE GTPASE ACTIVATING FAMILY PROTEIN 1 398 - -
Aev10g0242 398 SMART C2_3c 243 338 IPR000008 -
Aev10g0242 398 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 239 334 IPR035892 -
Aev10g0242 398 Pfam C2 domain 243 333 IPR000008 -
Aev10g0242 398 CDD C2_ArfGAP 241 385 - -
Aev10g0242 398 PANTHER ADP-RIBOSYLATION FACTOR GTPASE-ACTIVATING PROTEIN AGD12 1 398 IPR044518 GO:0005096|GO:0005543
Aev10g0242 398 CDD ArfGap 49 155 - -
Aev10g0242 398 SUPERFAMILY ArfGap/RecO-like zinc finger 47 161 IPR037278 -
Aev10g0242 398 Gene3D Arf GTPase activating protein 29 168 IPR038508 -
Aev10g0242 398 Gene3D C2 domain 241 395 IPR035892 -
Aev10g0242 398 Pfam Putative GTPase activating protein for Arf 48 161 IPR001164 GO:0005096
Aev10g0242 398 ProSiteProfiles ARF GTPase-activating proteins domain profile. 46 168 IPR001164 GO:0005096
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev10g0242 Aev-Chr10 2757761 2771615 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev10g0242 48 398 C2H2 Transcription Factor Family AT4G21160 47.578 4.29e-116 340
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev10g0242 K12486 - gmx:100799376 649.432