Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev10g0206 ATGAAAAATTTAACTGTCCATACTGAAGATTCTTTTTCAAGCTTACTTGAATTCGCTTCTAACAATGATTTTGAAGATTTTAAGCTAGCTTTAGACAGGGATGCTTCTCTAATAAATGAAGTTGGCATCTGGTATGTACGCCAGAATGGCTCCAAACAAATTGTTCCTGAGCACCGAACTCCTCTAATGGTTGCTGCTACCTATGGGAGCATAGATGTTCTTAAGCTTATACTCTCATGTCCTGAGGCTGATGTAAATTTCTCCTGCGGGACAGATAAAAGAACAGCCCTTCACTGTGCTGCTTCTGGTGGGTCTGTTAATGCAGTTGCTGTTGTGAAGCTTCTTTTATCAGCTGGTGCCGATCTTAATTGTTTGGATGCTAATGGAAACCGTCCTGTGGATGTTATTATTGTTCCCCCTAAGCTCCAAGGCATGAAAGCAATTCTTGAAGATCATCTCTCAGACAATGCTTCTGATGGGTCTGTTGATGGATGCTTTATTCCAGTGTCTGTTGATTCCTCAAGTCCTGGTTCGGCTGATCATTTATCATCGCTTGAAAATGGGTTGCCATCCTCTCCTTCCAGCTCACCATCTTCTCCTGTGGCTTCGAAGTTTACTGAAGCACCTGTCATTTCTACATCTGAGAAGAAAGAATATCCAATTGATCCGTCACTTCCTGATATAAAAAACAGCATATATGCAACAGATGAGTTCCGCATGTTTTCATTCAAGGTGAGGCCTTGTTCCCGTGCATATTCTCATGATTGGACTGAGTGCCCTTTTGTTCATCCGGGAGAGAATGCTCGCAGGAGAGACCCCAGAAAGTTCCATTACAGCTGTGTGCCATGCCCTGATTTTAGAAAGGGGGCTTGTAGACGTGGGGATATGTGCGAATATGCTCATGGGGTATTTGAGTGCTGGCTACACCCAGCCCAGTATCGGACAAGGCTCTGCAAAGATGGTACAAGTTGCAATAGAAGGGTATGTTTTTTTGCTCACACAGCAGAAGAGTTGCGTCCACTGTATGTGTCCACTGGATCTGCTGTCCCTTCTCCCCGCTCAACTGCTTCTACGCCTAATGTGATGGACATGGCTGCTGCAATGAGCCTTTTCCCTGGCTCTCCTTCAGCGATTTCTTCCATGCCTCCATCCCCCTTTGCACAGCCAATGTCTCCATCTGCAAATGGCATTTCGCACTCATCGGCTGGCTGGCCACAGCCTAATGTGCCAGCTCTTCATTTGCCCGGAAGCAATCTTCAGTCTAGTCGTTTAAGATCTTCTCTTAGTGCTCGTGACATGCCACCTGAAGACTTGAACTTGTTGCCAGATTTTGATGGCTCGCAACACCTTTTGAATGAATTGAGCTGTTTCTCACAGCTCCGTCCTGGTGCAGTCTCAGTGACTAGATCTGGTCGATCTAAAACACTAACTCCATCGAATCTTGATGAGCTCTTTTCTGCTGAAATTTCCTCATCACCTCGATACTCTGAACCAGTTGCGGCTTCTGTTTTTTCCCCTACACATAAGTCTGCTGTTCTCAATCAGTTTCAGCAGCTTCAAAGTACTTTATCACCTATAAACACAAACGTCTTGTCTCCCAAGAATGTTGAGCATCCTCTACTACAGGCATCATTTGGTGTCGCTTCCCCTGGAAGGATGTCGCCTAGAAGTTTGGAACCAATATCTCCAATGAGTGCCCGCATATCAGCATTCGCACAGCGCGACAAACAGCAACAGCTGCGGAGTCTTAGCTCAAGGGACCTTGGAGCTAATAATCCCGCTTCAGTTGTTGGGTCCCCTGTAAACTGGTCTAAGTGGGGATCTCCTAGTGGAAAAGCAGATTGGTCGGTAAATGGAAATGGAAATGGGCACGGGCAACTGCTAAGATCATCCTCTTTCGAGCTTGGAAACAACGGGGAAGAGCCTGATCTATCTTGGGTCCAATCACTTGTCAAGGAATCTCCACCCGAGATGATGATGAAGGAGAAGTTGGCTGGTTCTGGCCTTATTGCATCTGATGAAGGACCAAATTCAAATGCTCAAATTGAATCCATTGATCATGCTGTTATAGGAGCCTGGCTTGAGCAAATGCAGCTGGATCAGCTTGTAGTCTAG 2115 0.4582 MKNLTVHTEDSFSSLLEFASNNDFEDFKLALDRDASLINEVGIWYVRQNGSKQIVPEHRTPLMVAATYGSIDVLKLILSCPEADVNFSCGTDKRTALHCAASGGSVNAVAVVKLLLSAGADLNCLDANGNRPVDVIIVPPKLQGMKAILEDHLSDNASDGSVDGCFIPVSVDSSSPGSADHLSSLENGLPSSPSSSPSSPVASKFTEAPVISTSEKKEYPIDPSLPDIKNSIYATDEFRMFSFKVRPCSRAYSHDWTECPFVHPGENARRRDPRKFHYSCVPCPDFRKGACRRGDMCEYAHGVFECWLHPAQYRTRLCKDGTSCNRRVCFFAHTAEELRPLYVSTGSAVPSPRSTASTPNVMDMAAAMSLFPGSPSAISSMPPSPFAQPMSPSANGISHSSAGWPQPNVPALHLPGSNLQSSRLRSSLSARDMPPEDLNLLPDFDGSQHLLNELSCFSQLRPGAVSVTRSGRSKTLTPSNLDELFSAEISSSPRYSEPVAASVFSPTHKSAVLNQFQQLQSTLSPINTNVLSPKNVEHPLLQASFGVASPGRMSPRSLEPISPMSARISAFAQRDKQQQLRSLSSRDLGANNPASVVGSPVNWSKWGSPSGKADWSVNGNGNGHGQLLRSSSFELGNNGEEPDLSWVQSLVKESPPEMMMKEKLAGSGLIASDEGPNSNAQIESIDHAVIGAWLEQMQLDQLVV* 705
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev10g0206 704 MobiDBLite consensus disorder prediction 391 420 - -
Aev10g0206 704 SMART ANK_2a 92 124 IPR002110 GO:0005515
Aev10g0206 704 SMART ANK_2a 57 87 IPR002110 GO:0005515
Aev10g0206 704 MobiDBLite consensus disorder prediction 391 405 - -
Aev10g0206 704 PRINTS Ankyrin repeat signature 58 73 IPR002110 GO:0005515
Aev10g0206 704 PRINTS Ankyrin repeat signature 111 125 IPR002110 GO:0005515
Aev10g0206 704 MobiDBLite consensus disorder prediction 575 603 - -
Aev10g0206 704 Gene3D - 2 157 IPR036770 -
Aev10g0206 704 PANTHER UNKEMPT FAMILY MEMBER 1 702 IPR045234 -
Aev10g0206 704 Pfam Zinc finger C-x8-C-x5-C-x3-H type (and similar) 282 302 IPR000571 GO:0046872
Aev10g0206 704 PANTHER ZINC FINGER CCCH DOMAIN-CONTAINING PROTEIN 56 1 702 - -
Aev10g0206 704 Gene3D - 277 340 - -
Aev10g0206 704 ProSiteProfiles Zinc finger C3H1-type profile. 282 304 IPR000571 GO:0046872
Aev10g0206 704 SUPERFAMILY Ankyrin repeat 4 150 IPR036770 -
Aev10g0206 704 Pfam Ankyrin repeats (3 copies) 49 124 IPR002110 GO:0005515
Aev10g0206 704 SMART c3hfinal6 277 303 IPR000571 GO:0046872
Aev10g0206 704 SMART c3hfinal6 312 335 IPR000571 GO:0046872
Aev10g0206 704 ProSiteProfiles Ankyrin repeat region circular profile. 92 126 - -
Aev10g0206 704 ProSiteProfiles Ankyrin repeat profile. 92 127 IPR002110 GO:0005515
Aev10g0206 704 MobiDBLite consensus disorder prediction 177 203 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev10g0206 Aev-Chr10 2281979 2284093 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev10g0206 9 701 C2H2 Transcription Factor Family AT5G12850 54.020 0.0 671
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C3H Aev10g0206 Ank_2 1.2e-09 CL0465
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev10g0206 - - gmx:100813725 1137.87