Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev10g0141 ATGATTTGTCTTAGGATTTGCAAGTTTTATGCCCGCGGAGTATGTTTGAAAGGGGAGCAATGTGATTTTTCTCATGAGAGAAAAGATAATGCAGTTGATGCACCTGGACAGCAGATTTGTATTTTCTATCAAAAAGGATTATGTGCTTATGGTAGTCGATGCAAATATCAGCATGTCAAAGCTTCTCGCTCATCATCTTCTGCAAATGGACGCCAATCTCTTGTTTCAGATGCTGTTGCAACTCATACTACTGAAGGAGAATCATCAAGTTGGGTTCCAAAGGCTACAAAGTTGTCACCATCAGACAAGAAAGCAAGGAGCTCACAACATAAGCATCATGATTATCTTGGGAATGGTGATGTTGGTGAATCTAGTACTAGTAGTGCTATACCATCTGAACATCTTTTTTGTACATTCGCCGCTGCCAGCTGCCCCTTAAGAGACAAATGTTCTCGTGTTCATGGGAATCAATGTTTATACTGTAGAAAATACTGCTTGCATCCTACTGATCGAAGGGTAAAAGAAAATCACTTGAGGACTTGTGAGAAAAAGGAAAAATACCTTCAGGTTATGAAAGATAGTCAAGAAATAGAATGCAATGTTTGTCTTGATCGTGTTCTTTCGAAACCTAAACCATCTGAATGTAAGTTTGGGCTGCTTCCTGAGTGCGACCATGCTTTCTGCATATCTTGTATCCGCAACTGGCGTAGTAGTGCCCCATCCTCTGGAATGGAGATCAACAATAATAATAATACAGTGAAAACCTGCCCTGTGTGTCGCAAACTATCGTACTTTGTCATTCCAAGTGGTATTTGGTATTCTACAAAGGAGGAGAAGCAAGAAATTATTGACAACTACAAGGCTAACTGCAAGTTGATTGATTGCAAGCATTTTAACTTTGGAGATGGAAACTGCCTATTTGGGGCCAATTGTTTCTACAAGCATACTGTGAAGCCCGGTTCATACGCAAGTATTCATAGAAGGCAGCCACCTAGACGTAGACCAAACAATTATGATATGTATGATGTGTTGGATATGCTTGGTGAAGTTGATTTGTCAGGTGGAGAATTATATTCCATCATGAGGGACTCAGATTTGTTTGATGAAATGGATCCCTATGAAATGATGGCATTCTCAGATATGTTGGGCAATGGATCAGGTCCTTACCCTTTCAATTCCGATGATGAAGAGGATGAGAGCTTGAATATCTTTCAGATGGCTTCCTTGTCGGAGGCATTGGTTTCCGGTGTGGACGACTTTGGTGCTGAAGACTTTGACGAAGAATTGAACCCTATGGAGGTGGCATTTTTGTCATTGATGATGCATTCTGATATGGAAGACGAGGAAGAAGAATACAGTGGAGATGAGATCTACTAA 1377 0.406 MICLRICKFYARGVCLKGEQCDFSHERKDNAVDAPGQQICIFYQKGLCAYGSRCKYQHVKASRSSSSANGRQSLVSDAVATHTTEGESSSWVPKATKLSPSDKKARSSQHKHHDYLGNGDVGESSTSSAIPSEHLFCTFAAASCPLRDKCSRVHGNQCLYCRKYCLHPTDRRVKENHLRTCEKKEKYLQVMKDSQEIECNVCLDRVLSKPKPSECKFGLLPECDHAFCISCIRNWRSSAPSSGMEINNNNNTVKTCPVCRKLSYFVIPSGIWYSTKEEKQEIIDNYKANCKLIDCKHFNFGDGNCLFGANCFYKHTVKPGSYASIHRRQPPRRRPNNYDMYDVLDMLGEVDLSGGELYSIMRDSDLFDEMDPYEMMAFSDMLGNGSGPYPFNSDDEEDESLNIFQMASLSEALVSGVDDFGAEDFDEELNPMEVAFLSLMMHSDMEDEEEEYSGDEIY* 459
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev10g0141 458 ProSiteProfiles Zinc finger C3H1-type profile. 34 61 IPR000571 GO:0046872
Aev10g0141 458 Pfam Zinc finger C-x8-C-x5-C-x3-H type (and similar) 36 59 IPR000571 GO:0046872
Aev10g0141 458 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 176 289 IPR013083 -
Aev10g0141 458 MobiDBLite consensus disorder prediction 85 126 - -
Aev10g0141 458 Pfam RNA-binding, Nab2-type zinc finger 294 315 - -
Aev10g0141 458 Pfam RNA-binding, Nab2-type zinc finger 6 25 - -
Aev10g0141 458 PANTHER MAKORIN RING-ZINC-FINGER PROTEIN 5 454 - -
Aev10g0141 458 CDD RING-HC_MKRN 199 260 - -
Aev10g0141 458 SUPERFAMILY CCCH zinc finger 5 26 IPR036855 GO:0046872
Aev10g0141 458 SMART c3hfinal6 2 27 IPR000571 GO:0046872
Aev10g0141 458 SMART c3hfinal6 289 317 IPR000571 GO:0046872
Aev10g0141 458 SMART c3hfinal6 34 60 IPR000571 GO:0046872
Aev10g0141 458 ProSitePatterns Zinc finger RING-type signature. 223 232 IPR017907 -
Aev10g0141 458 MobiDBLite consensus disorder prediction 99 118 - -
Aev10g0141 458 Gene3D - 1 77 - -
Aev10g0141 458 ProSiteProfiles Zinc finger RING-type profile. 199 260 IPR001841 -
Aev10g0141 458 Pfam Zinc finger, C3HC4 type (RING finger) 199 259 IPR018957 GO:0046872
Aev10g0141 458 PANTHER MAKORIN-RELATED 5 454 IPR045072 -
Aev10g0141 458 SUPERFAMILY RING/U-box 193 266 - -
Aev10g0141 458 ProSiteProfiles Zinc finger C3H1-type profile. 6 28 IPR000571 GO:0046872
Aev10g0141 458 ProSiteProfiles Zinc finger C3H1-type profile. 289 318 IPR000571 GO:0046872
Aev10g0141 458 SMART ring_2 199 259 IPR001841 -
Aev10g0141 458 SUPERFAMILY CCCH zinc finger 37 58 IPR036855 GO:0046872
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev10g0141 Aev-Chr10 1407931 1410480 Tandem
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C3H Aev10g0141 zf-C3HC4 1.1e-06 CL0229
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev10g0141 K15687 - gmx:100788886 652.129