Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev10g0127 ATGAGTGTTATGTATAGTCCTGCTCTGAAATACTCAGATATAGTGCTAATGAAAAGCCAAGAAATGGAATCAAGTATTGGTAATCATCAACATCAAGAACAACAACACTGTCACCAGCAAAATTCTGGTTTATTGAGGTACCGTTCTGCTCCAAGCTCATTCCTTGCAAGCCTTGTTGAGGATGATCCTGAGCATTATGTTCAATCCACAAGTTCAGAAATGGATACAGTGTTGTTCTCAAAGCTGATATCGCCCAACAATGGATGGAGCAATGATTCTGAACATGAGCTGTTTGAAGAAAGGTATGTGAAGCAGGAAGAGGAAGAAGAAGAAGAAGAAGAAGCAGAGAAAAAACAGAGTAGTGGTTACTGTTATGGGTCAGAGTTGGTTTACCAGTCTCAGCAAATTCAATGCTTGGCAAATGGTGGAGGTGATGATTCCAATGGCTTTGATGGATCTTTTGGTGCTGTGAATTCCATCACTTCAGGTGAAGCTAAAATGGGTGTTAGGAGTTGCTCCAATCTCATCAGGCAAAAGAGCTCACCAGCTGGATTTTTCTCCAATGAAAATGCACTGAGAGAGATAGGAAGCTTTAGAGGCAGTGATGTCTCAAATGGACAAGCTACTGCATCAACCAGTGGGTTGCATGGTGGTCTTCCCTTCCCATCTAGGCCATCCTCTTGCTTGAAACGGATGCCACAGATCGCCGAAAATGAAAGCGTCGTAGAAGGAAATAGTGGCCAGAGTAGAGATCTGGTAAATGACAATGGCAGTTCTAAGTGTTATGTCCCTAGCTTCACCAATGAATTCTGGGACGGTTCTGCATTTGATTCCCGGAAAACAGCAAGTGAAGATGAAATCATGTTTTCTACCTCAAATGCTTTGGAGTCTCAGGATTCGGATTTTAGCTCTCAAAATATTGGTTTGACTCATCATTTGAGTCTGCCTAGTTCTTCTACCAAGATGGCATCGATCGAGAAGTTTCTTCAACTTCAAGGAAGTGTTCCTTGTAAAGTTCGAGCGAAAAGAGGCTTCGCCACTCACCCTAGAAGCATTGCAGAGAGGGTAAGAAGAACTAAGATCAGTGAAAGAATCAAGAAATTGCAAGGCCTTTTCCCAAAATCAGACAAGCAAACAAGCACAGCAGATATGTTGGATTTGGCAGTTGAGTACATTAAAGACTTGCAAGAACAGGTTAAGATGCTCACAGATGTTAGGGCAAGGTGCAAATGTACAAGTAATCAGAATCAATACTCTTGA 1260 0.4198 MSVMYSPALKYSDIVLMKSQEMESSIGNHQHQEQQHCHQQNSGLLRYRSAPSSFLASLVEDDPEHYVQSTSSEMDTVLFSKLISPNNGWSNDSEHELFEERYVKQEEEEEEEEEAEKKQSSGYCYGSELVYQSQQIQCLANGGGDDSNGFDGSFGAVNSITSGEAKMGVRSCSNLIRQKSSPAGFFSNENALREIGSFRGSDVSNGQATASTSGLHGGLPFPSRPSSCLKRMPQIAENESVVEGNSGQSRDLVNDNGSSKCYVPSFTNEFWDGSAFDSRKTASEDEIMFSTSNALESQDSDFSSQNIGLTHHLSLPSSSTKMASIEKFLQLQGSVPCKVRAKRGFATHPRSIAERVRRTKISERIKKLQGLFPKSDKQTSTADMLDLAVEYIKDLQEQVKMLTDVRARCKCTSNQNQYS* 420
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev10g0127 419 Coils Coil 95 115 - -
Aev10g0127 419 SMART finulus 351 401 IPR011598 GO:0046983
Aev10g0127 419 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 345 395 IPR011598 GO:0046983
Aev10g0127 419 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 347 412 IPR036638 GO:0046983
Aev10g0127 419 Pfam Helix-loop-helix DNA-binding domain 350 396 IPR011598 GO:0046983
Aev10g0127 419 Gene3D - 347 417 IPR036638 GO:0046983
Aev10g0127 419 PANTHER TRANSCRIPTION FACTOR BHLH FAMILY-RELATED 33 415 - -
Aev10g0127 419 PANTHER TRANSCRIPTION FACTOR BHLH83-RELATED 33 415 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev10g0127 Aev-Chr10 1256187 1259051 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev10g0127 22 413 Basic Helix-Loop-Helix Transcription Factor Gene Family AT1G51140 37.317 4.17e-59 196
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Aev10g0127 HLH 5.1e-10 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev10g0127 - - gmx:100812802 522.702