Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev10g0108 ATGGATTCTTCCGGTGAACTTGAATCGTTGCCACCTCCGCCGCAGGTCATTCCTCCGAATGTTGTTCCTACAAAAGTTGCTGAATTTGGAAAAGAAGTTTCGAAGGCAAAACTTGTGCCAATGGCTAGGAGAGGTGTTGGATCCAAGGGACAGAGGATACAGCTTCTGACTAACCATTTTAGAGTTGCCGAGCGCAGAATGGATGGCTACTTTTATCATTATAGTGTTGCCTTGTCTTATGAAAATGGGGGTCCAGTTGAAGCTAAAGGTATTGGAAGAAAGGTTATAGATAAAGTTTACGAAACATATGATGAGCTGAAGAAAACGGATTTTGCGTATGATGGCGAGAAGAGCTTGTTTACACTTGGTTCCTTACGGGAGAACAAGTTATACTTCACTGTTGTGTTGGAGGATGTTTCATCAAGAAGGGTTGGAAGGGACAGCATTACTGATGGAGACACAAAGAGAATGAGGCGTCAATCTCAATCCAAAACTATCAAGGTGGCTATCAGTTATGCAGCCAAAATCCCACTGCAAGTGATTGCGAGTGCTTTGCGTGGACAAGATTCTGCGCACTTCCAGGAAGCATTGAGGGTCCTAGACATTATACTGAGGCAAAATGCAGCAAAGAAGGGTTGTCTCCTTGTTCGCCAATCCTTCTTTCAAGACAATCCAAGGAATTATACTGATCTTGGAGGCGGCGTTCAAGGTTGCCGTGGATTCCATTCTAGTTTCCGGGCCACTCAAGGAGGTCTATCTCTGAATATTGATGTTTCAACTACCATTCTGGTAAAGCCTGGCCCTGTATTAGACTTCCTATGTGAGAATCAGAATGTTAACCATCCGAACCGTATTGATTGGGCCAAGGCAAAAAGAACGCTGAAAAGCCTCAGAATCAAGGCTAATAATATCGAGTACAAAATCACTGGATTGAGTGATAAGCCCTGCAGGAAGCAGATGTTTTCATTAAAAAATGGACAGGATCCAAAAGGTGAAGCGCAATTCATTGAAATCACAGTTTATGAATACTATAAATACCATAAGAGGATTCAACTGCAATGTTCTGCTGATTTTCCCTGCATCAATGTTGGCAAGCCAAAGCGCCCAACTTATTTTCCAGTGGAGCTATGCACCTTGGTCTCGTTACAGCGGTACACGAAGGCATTGTCAAATTTGCAAAGGGCTCAGTTAGTGGAGAGATCAAGGCAAAATCCAAAAGAAAGGAAACAAATTTTGTCCGATTCCTTTAGAAACAGCAGATATGGCAATGAGCCTATGCTCCGCTCTGCTGGACTTACCATTGAGTCTGATTTTACCCAAGTCTGTGGCCGTGTTCTCGAACCTCCAAGGCTTAGAGTTGGAAATGGGGAGGATTTCGTACCCCGGAATGGGCGCTGGAACTTTAACAATAAGAAACTTGTTAGACCTGTGAAGATTTTCCGTTGGGCCATTGTGAACTTCTCAGCTCGTTGTGATATAAGAAGATTGTGCGAAAGCCTTGAGAAGTGTGCAGTACAGAAGGGGATTGACATGAAACGCCCCTTAGGTATATTTGAAGAGGATCCTTGCTTCAGAGGTGAGTCAGCTCCTGCTAGAGTGGAGAATATGTGTAAAACCATTAGTGGCGCATTGTCAGAATCTCTTCAACTGCTGCTGTGTATTCTTCCAGAGAGGAAGAATTCAGATATTTATGGACCTTGGAAAAGGAGAAATCTTGTTGAGGAAGGGGTTGCTACACAATGTATTGCACCAACAAGATTCAATGATCAATACATTACCAATGTCCTGCTGAAAATTAATGCAAAGCTTGGTGGGATGAATTCTCTTCTGTCAATGGAGTGCTCTCCTTCCATACCATTTCTCTATAATGAACCTACCTTAATTCTTGGTATGGATGTCTCACATGGATCTCCTGGCCGTTCGGATGCGCCATCTATCGCTGCTGTTGTCAGCTCGAGATCTTGGCCTTTGATTTCATGTTATAGAGCTGCAGTTCGTACTCAGTCACCAAAAGTTGAGATGATCCAGTCTTTATTCAAGCCTGTTTCTGATACTAGAGACGAAGGTATCATAAGGGAGCTGCTTATCGATTTCTATGCAAGTTCGGGAAAAAGGAAGCCAGGACAAATTATAATTTTCAGGGATGGTGTAAGTGAATCACAGTTCATCAAGGTCTTGAATGAAGAGTTAGTGCCAATCATTGAGGCATGCAAACATCTTGATCAGAAGTGGTCTCCCAAGTTCACTTTTATTGTTGCATTGAAGAATCATCATACTAAGTTCTTTAAGGAAAATGCTCCGGATAATATTCCACCTGGAACCGTTATTGACACCAAAATCTGCCATCCAAGGAACAATGACTTCTACATGTGTGCTCATTATGGCTCAATTGGGACAAGTCGACCTACTCATTACCATGTTTTACATGATGAGATCGGTTTCTCTGCAGATGATTTGCAAGAATTAGTCCATTCTCTATCTTATGTGTATCAGAGGAGCACAACGGCCATATCAGTAGTTGCTCCGATTTGCTATGCGCACTTGGCAGCTGCTCAGATGGCGCAATTTTTAAAGTTTGACGAACTGTCAGAGACTTCTTCCAGCCATGGTGGAATGACATATGCTGGTGCACCTCAAGTGCCTAAACTGCCCAGACTCCACGATCGTGTCACCAACTCCATGTTCTTTTGTTAA 2694 0.4302 MDSSGELESLPPPPQVIPPNVVPTKVAEFGKEVSKAKLVPMARRGVGSKGQRIQLLTNHFRVAERRMDGYFYHYSVALSYENGGPVEAKGIGRKVIDKVYETYDELKKTDFAYDGEKSLFTLGSLRENKLYFTVVLEDVSSRRVGRDSITDGDTKRMRRQSQSKTIKVAISYAAKIPLQVIASALRGQDSAHFQEALRVLDIILRQNAAKKGCLLVRQSFFQDNPRNYTDLGGGVQGCRGFHSSFRATQGGLSLNIDVSTTILVKPGPVLDFLCENQNVNHPNRIDWAKAKRTLKSLRIKANNIEYKITGLSDKPCRKQMFSLKNGQDPKGEAQFIEITVYEYYKYHKRIQLQCSADFPCINVGKPKRPTYFPVELCTLVSLQRYTKALSNLQRAQLVERSRQNPKERKQILSDSFRNSRYGNEPMLRSAGLTIESDFTQVCGRVLEPPRLRVGNGEDFVPRNGRWNFNNKKLVRPVKIFRWAIVNFSARCDIRRLCESLEKCAVQKGIDMKRPLGIFEEDPCFRGESAPARVENMCKTISGALSESLQLLLCILPERKNSDIYGPWKRRNLVEEGVATQCIAPTRFNDQYITNVLLKINAKLGGMNSLLSMECSPSIPFLYNEPTLILGMDVSHGSPGRSDAPSIAAVVSSRSWPLISCYRAAVRTQSPKVEMIQSLFKPVSDTRDEGIIRELLIDFYASSGKRKPGQIIIFRDGVSESQFIKVLNEELVPIIEACKHLDQKWSPKFTFIVALKNHHTKFFKENAPDNIPPGTVIDTKICHPRNNDFYMCAHYGSIGTSRPTHYHVLHDEIGFSADDLQELVHSLSYVYQRSTTAISVVAPICYAHLAAAQMAQFLKFDELSETSSSHGGMTYAGAPQVPKLPRLHDRVTNSMFFC* 898
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev10g0108 897 ProSiteProfiles Piwi domain profile. 550 858 IPR003165 GO:0003676
Aev10g0108 897 ProSiteProfiles PAZ domain profile. 306 381 IPR003100 GO:0005515
Aev10g0108 897 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 2C 8 896 - -
Aev10g0108 897 SMART Piwi_a_2 550 858 IPR003165 GO:0003676
Aev10g0108 897 SUPERFAMILY PAZ domain 261 421 IPR036085 GO:0005515
Aev10g0108 897 Pfam Piwi domain 551 858 IPR003165 GO:0003676
Aev10g0108 897 CDD Piwi_ago-like 425 852 IPR045246 -
Aev10g0108 897 Pfam Argonaute linker 1 domain 216 263 IPR014811 -
Aev10g0108 897 Pfam Argonaute linker 2 domain 407 452 IPR032472 -
Aev10g0108 897 Gene3D - 445 611 - -
Aev10g0108 897 Pfam N-terminal domain of argonaute 51 204 IPR032474 -
Aev10g0108 897 CDD PAZ_argonaute_like 266 380 - -
Aev10g0108 897 PANTHER TRANSLATION INITIATION FACTOR 2C, PUTATIVE-RELATED 8 896 - -
Aev10g0108 897 SUPERFAMILY Ribonuclease H-like 534 856 IPR012337 -
Aev10g0108 897 Pfam PAZ domain 270 397 IPR003100 GO:0005515
Aev10g0108 897 SMART DUF1785_2 214 266 IPR014811 -
Aev10g0108 897 Gene3D - 618 897 IPR036397 GO:0003676
Aev10g0108 897 Gene3D paz domain 260 385 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev10g0108 Aev-Chr10 1078306 1084734 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev10g0108 34 897 Eukaryotic Initiation Factors Gene Family AT1G48410 35.512 2.03e-155 482
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev10g0108 K11593 - pop:7486850 1255.74