Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev10g0107 ATGTCACCTTTGTTCCTCTTGCTCTCCCTTCTCCTCCTCTTCCTCTTTGCACCCCCATCACTCCAACTTCAACTTTCTTCCTCTAACAACAATTCTTCTTCTTCATCTTCTTCCTCCTCCTCCTCTGCCTCAGCTTGCAAATCCACATTGTATCCAAAACTCTGCCGCTCCATACTCTCTGCCATACGCTACTCCCCTTCTTCTGATCCATACGCCTACGGCAAATTCTCCGTCAAGCAAAGCCTCAAACAAGCCACAAAACTAGCCAAAGTCTTTGACGATTTCCTCCACCGCCGCCACCCGCCGAACCACGCAGAGGTGGCTGCACTGGGCGACTGCAGAGACCTCAACAAGCTCAACGTGGATTTCTTGGAGTCAATCTCGGAGGAACTAAAGTCAGCAACTAGTAATAATAATAATTCTTATTCTTCGGACACAGATGAGTTGGTGGAGAAGATTGAGAGTTACCTGAGTGCGGTGGCCACGAACCACTACACGTGCTATGATGGGTTGGTGGTTACCAAGAGTGGCATTGCGAGTGCGCTGGCGGTGCCGCTCAAGGGAGTGACGCAATTGTACAGTGTGTCGCTTGGGTTGGTGAGTGAGGCGCTGGATAGGAACTCGAGGAAGAAGAACAATAAGACTCGCAAACATGGCCTCCCCACCAAGGCCTTCAAGGTCAGGCAGCCACTTGACAAACTCATCAAGCTTCTTCGAACAAAGTATAGTTGCAAGAACTACTCGAATTGTACAAGAACAGAGAGGATTCTTAAAGAGAGCCAAAGCCAAGGAATTCTACTGAATGATTTTGTGATAGTGAGCTCTTATGGTACAGACAACTACACTACAATTGGGGAAGCAATCGCAGGTGCGCCGAATGACACAAAGGCAGAGGATGGGTATTACCTTGTGTACGTGAGAGAAGGATACTATGAGGAATATGTGATTGTTCCAAAAGAAAAGAAGAACATATTGCTTATTGGAGATGGTATTAACAAGACTGTCATCACAGGCAACCATAGTGTCATAGATGGCTGGACAACCTTTAATTCTTCCACCTTCGCTGTTGCTGGAGAAAGGTTCATCGCAGTGGATGTTACCTTTAGAAACACAGCTGGTCCTGAAAAGCACCAAGCAGTAGCAGTAAGGAACAATGCTGACCTTTCCACATTCTACCGATGCAGTTTCGAAGGTTACCAAGACACACTCTACGTCCACTCCCTGAGACAATTCTACAGAGAATGCGATATTTACGGCACAGTCGACTTCATATTTGGCAATGCAGCTGTAGTGTTCCAGAGTTGTAACATCTATGCCAGAAAACCAATGGCAAACCAGAAGAATGCTTTAACTGCACAAGGAAGAACAGATCCAAATCAGAACACCGGCATTTCCATCCAGAATTGCACAATTGATGCTGCACCGGATTTGGCAGCAGAGATGAACTCAACATTGAGTTACTTAGGAAGGCCTTGGAAGGAGTATTCAAGGACTGTGTATTTGGAGTCATATATTGGAGATTTGATTCAACCTGTTGGGTGGTTAGAATGGAATGGAACAGTTGGGTTAGACACACTTTTCTATGGGGAGTTTGACAACTATGGACCTGGTTCTAACACTAACAACAGAGTGCAATGGCCTGGTTACTCTGTGTTGAATGCTACACAAGCTTGGAACTTCACGGTCCTTAATTTTACACTAGGAAATACCTGGCTTCCTGATACTGATATACCCTATACTGAAGGATTGTTAAATTAG 1758 0.4556 MSPLFLLLSLLLLFLFAPPSLQLQLSSSNNNSSSSSSSSSSSASACKSTLYPKLCRSILSAIRYSPSSDPYAYGKFSVKQSLKQATKLAKVFDDFLHRRHPPNHAEVAALGDCRDLNKLNVDFLESISEELKSATSNNNNSYSSDTDELVEKIESYLSAVATNHYTCYDGLVVTKSGIASALAVPLKGVTQLYSVSLGLVSEALDRNSRKKNNKTRKHGLPTKAFKVRQPLDKLIKLLRTKYSCKNYSNCTRTERILKESQSQGILLNDFVIVSSYGTDNYTTIGEAIAGAPNDTKAEDGYYLVYVREGYYEEYVIVPKEKKNILLIGDGINKTVITGNHSVIDGWTTFNSSTFAVAGERFIAVDVTFRNTAGPEKHQAVAVRNNADLSTFYRCSFEGYQDTLYVHSLRQFYRECDIYGTVDFIFGNAAVVFQSCNIYARKPMANQKNALTAQGRTDPNQNTGISIQNCTIDAAPDLAAEMNSTLSYLGRPWKEYSRTVYLESYIGDLIQPVGWLEWNGTVGLDTLFYGEFDNYGPGSNTNNRVQWPGYSVLNATQAWNFTVLNFTLGNTWLPDTDIPYTEGLLN* 586
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev10g0107 585 Pfam Pectinesterase 271 568 IPR000070 GO:0030599|GO:0042545
Aev10g0107 585 Gene3D - 269 585 IPR012334 -
Aev10g0107 585 SUPERFAMILY Pectin lyase-like 269 582 IPR011050 -
Aev10g0107 585 PANTHER PECTINESTERASE 8 583 - -
Aev10g0107 585 Pfam Plant invertase/pectin methylesterase inhibitor 43 198 IPR006501 GO:0004857
Aev10g0107 585 PANTHER PECTINESTERASE 8 583 - -
Aev10g0107 585 ProSitePatterns Pectinesterase signature 2. 417 426 IPR033131 -
Aev10g0107 585 SMART PMEI_2 37 199 IPR006501 GO:0004857
Aev10g0107 585 Gene3D Invertase/pectin methylesterase inhibitor family protein 43 203 IPR035513 -
Aev10g0107 585 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 44 201 IPR035513 -
Aev10g0107 585 TIGRFAM PME_inhib: pectinesterase inhibitor domain 21 199 IPR006501 GO:0004857
Aev10g0107 585 CDD PMEI-like_3 46 202 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev10g0107 Aev-Chr10 1069819 1076947 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev10g0107 45 585 Carbohydrate Esterase AT3G10720 61.931 0.0 709
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev10g0107 K01051 - gmx:100816503 909.057