Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev10g0106 ATGGATATAGACCTTAGGTTACCTTCTGGTGAACATGACAAAGACGATGAAGAAGCAACTACAATTGATAACATATTGGATGGTGAAGAAAAATTGCACAATGGAGGTATAGAGGGCAGAAATATAGTTGACCCTGGTATTGAGTTACATGCTTTAAATGGTGGTGATTTGAATTCACCTACAGTTGATATGGTAATGTTCAAGGAAGATACAAATCTTGAGCCACTCTCTGGCATGGAATTTGAGTCACATGGGGAAGCTTATTCCTTCTACCAAGAATATGCTCGTTCAATGGGATTCAACACTGCAATACAAAATAGTCGTCGTTCAAAAACATCAAGAGAATTTATAGATGCTAAGTTTGCGTGCTCGAGATATGGCACAAAACGGGAGTATGACAAATCATTCAATCGACCACGTGCGAGGCAGAACAAGCCAGATTCTGAAAATTCAACTGGTCGAAGATCTTGTTCCAAGACTGACTGTAAAGCAAGCATGCATGTAAAAAGAAGGCCAGATGGAAAGTGGGTTATACATAGTTTTGTGAAGGAGCATAATCATGAGCTTTTACCAGCCCAAGCAGTCAGTGAACAAACAAGAAGAATGTACGCTGCTATGGCTAGACAGTTTGCTGAATACAAAACTGTGGTTGGTCTCAAGAATGAGAAGAACCCATTTGATAAAGGACGGAATTTGGGCCTCGAGTCAGGGGAGGCTAAACTCATGCTTGATTTTTTTGTACAAATGCAAAATATGAACTCTAATTTCTTCTATGCTGTAGATCTTGGTGATGATCAAAGACTGAAAAGTCTTCTATGGATTGATGCTAAAAGTAGGCATGACTATAGCAACTTTTGTGATGTAGTCTCATTTGATACCACCTATGTTAGAAACAAATATAAGATGCCTCTTGCTCTGTTTGTTGGAGTGAACCAGCATTATCAATTTGTATTACTTGGGTGTGCCTTGATATCAGATGAAAGTGCCACAACTTTTTCTTGGCTAATGCGGACGTGGCTGAAAGGAGTTGCTGGTCAAGTTCCAAAAGTGATAATTACCGAACATGACAAGACTTTGAAGTCAGTTATTGCAGATACATTCCCTAATTCTTGTCATTGTGTCTCTTTATGGCATGTATTGGGTAAGGTATCTGAGAATTTATCTCATGTGATTAAAAAACATGAGAAGTTTATGGCAAAATTTGAAAAATGCATATACAGGTCATTAACCAGTGATGACTTTGAGAAGAGATGGTGGAAAATTGTTGATAGGTTTGAACTTCGAGAGGATGAATGCATGCAGTCATTGTATGAAGATCGTAAATTATGGGCACCAACATTCATGAAGGATGTTTTCTTAGGTGGTATGTCTACTGTCCAACGATCTGAAAGTGTGAATTCCTTCTTTGACAAATATGTTCATAAGAAGACTTCGGTGCAAGATTTTGTTAAACTGTATGAAGCAGTCATGCAAGACAGGTATGAAGAGGAAGCAAAAGCAGATTCTGATACCTGGAACAAAGTAGCGACATTGAAAACTCCTTCACCTTTAGAGAAGAGCGTTGCAGGCATTTACACACACGCCGTATTCAAGAAGATTCAAGCTGAGGTTGTTGGTGCAGTTGCTTGTCATCCTAAAGCTGACAGACAGGATGATACAACTGTTATTCACAGGGTTCATGACATGGAAACAAATAAAGACTTCTTTGTTGTGATGAATGAAGCAAAACCAGAATTGTCTTGTATATGTCGGTTATTTGAATATAGAGGCTATCTTTGTCGACATGTATTGGTTGTTCTGCAATATTCTGGCCATTCTGTTATCCCGCCCCAATATATTTTGAAACGCTGGACAAAAGATGCAAAGGTAAGGAATATGATAGGAGAAGAATCTGAACATATGCTGGCTAGGGTGCAAAGATATAATGATTTATGTCAGCGTGCTCTTAAACTGAGTGAAGAGGGATCTCTTTCTCAAGAGAGTTACAGTATTGCGGTCCATGCACTTCATGAAGCACAGAAAAGCTGTGTGAGTGTTAATAATTCTAGCAAGAGTTCTGCAGAAGCTGGTACGTCAGTGGCTCATGGTCAGCTTTCAACTGAAGAAGATACCCAAAGTAGAAATATAGGCAAGTCAAACAAGAAGAAGAATCCTACTAAAAAGAAAAAGGTGAACTCTGAAGCAGAAGTGATGACTGTTGGAGCACTAGACAGCTTGCAACAAATGGACAAGTTCAGCACAAGAGCTGCAGTAACCCTTGATGGTTATTATGGCACACAACAGAGTGTGCAGGGAATGCTGAACTTAATGGGGCCAACACGGGATGATTATTATGGGAATCAGCAGACACTTCAGGGGCTGGGACCAATAAGTTCCATACCACCCAGCCACGATGGTTATTATGGTGCACATCAGAGCATGCCTGGTCTGGCACAACTGGATTTTTTGCGAACAGGCTTCACTTATGGGATCCGGCAGGATGATCCTAATGTGAGAGCAGCACAGTTGCATGAGGATCCATCAAGGCATGCTTGA 2535 0.402 MDIDLRLPSGEHDKDDEEATTIDNILDGEEKLHNGGIEGRNIVDPGIELHALNGGDLNSPTVDMVMFKEDTNLEPLSGMEFESHGEAYSFYQEYARSMGFNTAIQNSRRSKTSREFIDAKFACSRYGTKREYDKSFNRPRARQNKPDSENSTGRRSCSKTDCKASMHVKRRPDGKWVIHSFVKEHNHELLPAQAVSEQTRRMYAAMARQFAEYKTVVGLKNEKNPFDKGRNLGLESGEAKLMLDFFVQMQNMNSNFFYAVDLGDDQRLKSLLWIDAKSRHDYSNFCDVVSFDTTYVRNKYKMPLALFVGVNQHYQFVLLGCALISDESATTFSWLMRTWLKGVAGQVPKVIITEHDKTLKSVIADTFPNSCHCVSLWHVLGKVSENLSHVIKKHEKFMAKFEKCIYRSLTSDDFEKRWWKIVDRFELREDECMQSLYEDRKLWAPTFMKDVFLGGMSTVQRSESVNSFFDKYVHKKTSVQDFVKLYEAVMQDRYEEEAKADSDTWNKVATLKTPSPLEKSVAGIYTHAVFKKIQAEVVGAVACHPKADRQDDTTVIHRVHDMETNKDFFVVMNEAKPELSCICRLFEYRGYLCRHVLVVLQYSGHSVIPPQYILKRWTKDAKVRNMIGEESEHMLARVQRYNDLCQRALKLSEEGSLSQESYSIAVHALHEAQKSCVSVNNSSKSSAEAGTSVAHGQLSTEEDTQSRNIGKSNKKKNPTKKKKVNSEAEVMTVGALDSLQQMDKFSTRAAVTLDGYYGTQQSVQGMLNLMGPTRDDYYGNQQTLQGLGPISSIPPSHDGYYGAHQSMPGLAQLDFLRTGFTYGIRQDDPNVRAAQLHEDPSRHA* 845
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev10g0106 844 MobiDBLite consensus disorder prediction 686 727 - -
Aev10g0106 844 MobiDBLite consensus disorder prediction 686 706 - -
Aev10g0106 844 MobiDBLite consensus disorder prediction 132 165 - -
Aev10g0106 844 Pfam FAR1 DNA-binding domain 89 191 IPR004330 -
Aev10g0106 844 PANTHER FAR-RED ELONGATED HYPOCOTYLS 3-RELATED 48 778 - -
Aev10g0106 844 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 48 778 IPR031052 GO:0006355
Aev10g0106 844 ProSiteProfiles Zinc finger SWIM-type profile. 568 604 IPR007527 GO:0008270
Aev10g0106 844 Pfam MULE transposase domain 288 380 IPR018289 -
Aev10g0106 844 Pfam SWIM zinc finger 578 602 IPR007527 GO:0008270
Aev10g0106 844 SMART 26again6 579 606 IPR006564 GO:0008270
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev10g0106 Aev-Chr10 1042924 1046836 Dispersed/Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Aev10g0106 FAR1 1.1e-27 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev10g0106 - - gmx:100817034 1564.67
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aev10g0106 10 1042924 1046836 Aev10g0106 10 1042924 1046836 ECH