Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev10g0082 ATGGCAGGATCTAGCTCTGAGCAAGCCTCTGGCTTCTCTGCCACTACGTGCGAACATGATCAACCATCCAACAACAACAATCCCCAAATACTGGAATTCGTGAATCTATCCAATTTCGATTCTGTTTGTGGATCGTCTTCCAAAGTAGAACTCAATTTTTTCCACTCTGATGATACGCCTATGAGAGTTATTAGCAGCAACAATATTGAAGGAATAGATGAGAACGAGAATGCTGAGGACGAGGAGGAAAACAAATTATTAGCATCATCAGCAACAACAAAAACATTCTCATGCAGTTTTTGCAAGAGAGAGTTCTCGTCTTCGCAAGCATTGGGAGGGCACCAAAACGCGCACAAGCAAGAGCGTGCAATCGCGAAACGCCGCCGAGAGATCGATGTTGGCGGCGCTTTTGGGTACCCTTATTTCCCAAACCTTCCCACACATTCCTCCTTGTATGAATCCTACAATAGGGCACTTGGGGTTCGTTTGGAATCCATGATTCATAAGCCTCCTTCATATCCTTGGACTGCCCTTAGGTTTGGTACATCAAGAAATAATAATGCCCTTAACATTGGGGGTGCTGGACTTGGGATTTTAGCAAGTGGTAGTGGTGGCTCAACTTTGAAGATAGAAGATGAAAATAATAAAAATAATCTTCTTCATAGTGCAATTCGACCTGTTATTCCTTCTACTTCTAATATTATTATTGCCTCGAGTTCAAACACTAGTGTCACTAACAAGGCAACTACTCTGACTAGCACTGAGGATTATCGTCATCATCTTCCCAAGCCAAATAATCCAGAACCATCCAGCAATTCTATTCTTGATTTGTCACTTAAGCTTTAA 846 0.422 MAGSSSEQASGFSATTCEHDQPSNNNNPQILEFVNLSNFDSVCGSSSKVELNFFHSDDTPMRVISSNNIEGIDENENAEDEEENKLLASSATTKTFSCSFCKREFSSSQALGGHQNAHKQERAIAKRRREIDVGGAFGYPYFPNLPTHSSLYESYNRALGVRLESMIHKPPSYPWTALRFGTSRNNNALNIGGAGLGILASGSGGSTLKIEDENNKNNLLHSAIRPVIPSTSNIIIASSSNTSVTNKATTLTSTEDYRHHLPKPNNPEPSSNSILDLSLKL* 282
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev10g0082 281 MobiDBLite consensus disorder prediction 265 281 - -
Aev10g0082 281 PANTHER ZINC FINGER PROTEIN JAGGED 20 281 IPR045320 GO:0003700
Aev10g0082 281 MobiDBLite consensus disorder prediction 256 281 - -
Aev10g0082 281 Pfam C2H2-type zinc finger 96 120 - -
Aev10g0082 281 Gene3D Classic Zinc Finger 77 133 - -
Aev10g0082 281 ProSiteProfiles Zinc finger C2H2 type domain profile. 96 123 IPR013087 -
Aev10g0082 281 PANTHER AND C2HC ZINC FINGERS SUPERFAMILY PROTEIN, PUTATIVE-RELATED 20 281 - -
Aev10g0082 281 ProSitePatterns Zinc finger C2H2 type domain signature. 98 118 IPR013087 -
Aev10g0082 281 SUPERFAMILY beta-beta-alpha zinc fingers 93 123 IPR036236 -
Aev10g0082 281 MobiDBLite consensus disorder prediction 1 29 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev10g0082 Aev-Chr10 787769 788614 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev10g0082 88 281 C2H2 Transcription Factor Family AT5G10970 34.518 7.68e-23 93.2
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Aev10g0082 zf-C2H2_6 2.3e-05 CL0361
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev10g0082 - - ccaj:109807193 163.31
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aev10g0082 10 787769 788614 Aev10g0082 10 787769 788614 ECH