Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev10g0065 ATGAGCATGTTAGGCCTGAGAGACCTAGTACTGATAGCTCCAACCCCTTCTTCCCTTCACCACCACCACCACCACCACCAGGGCCAACCCATTTCATCAGATCACAACAACAACAGTTCCAATCTCAGCGTTGGATTTGGGATCTTCCCTCTCCTTACGGCCACGCCCTGCGTCCCACAACAGCACAACAACAACAACAACAATAACAATAATGATGTTCAAGAGTGTGGCACCACCACCACCAACCCTAACCCCAACCCCAACAATTACTGGAACCTCAAGATGTGCCCTGAAGTGATGATGATGAAAAAGGGATCATCGTCGCTAGGATTGGTCAACAGCAACAACGTGGAGGAAGACGATGAAGATGATGACGGTGGGGCCCACAATAACAGGGCAGTGAATGTGATGATGATGGAGAGCGAGGAGGAACTCGGCGTTGGCGGTGAATTCAGGGTCTGTCAAGACTGTGGAAACAGGGCAAAGAAGGATTGCGTGTATAGAAGGTGCAGGACTTGTTGCAAGGGCCGTGGGTATGACTGCAACACTCACGTGAGGAGCACGTGGGTCCCTGCCCTCCGACGCCGGGAGCGCCAGATGGCAGTTGGTGCCGGTGGAAGTTGCAGCGGCGGCGGCGATTCTCCCGGAGCTAAGAGGCCGAGAGCTCTGGGGTTATCTCAAAATGCTACTGCTACCTCTCATAGTTCCAATTCTAATGCCACCACTCCTAAGAGCTTGGACACTACCTCTTGTCACCAAGATGCTGGTTTTAAACAGTCATTACCGGGTCATGTTCGTGCACCTGCAGTATTCAGGTGCCATAGAGTGTCAGCAATTGGCAATGGTGAAAACGAAATTGCATACTTGGCCACAGTAAATATTAGTGGGCATGTGTTCAAGGGGTTTCTCTATGATCATGGCGTTGAAGGCAAAAATGCAATGCCCTGTGCTTCAGAACTTCAACTTGGAAACAATTGCAGCAGTGGAAAGAACAAGGATTGCTCTTCTGCTTTTGGGGTTCCTACCAATCCTGCTTACTCTGCTTCTGCTAGCTGA 1056 0.5057 MSMLGLRDLVLIAPTPSSLHHHHHHHQGQPISSDHNNNSSNLSVGFGIFPLLTATPCVPQQHNNNNNNNNNDVQECGTTTTNPNPNPNNYWNLKMCPEVMMMKKGSSSLGLVNSNNVEEDDEDDDGGAHNNRAVNVMMMESEEELGVGGEFRVCQDCGNRAKKDCVYRRCRTCCKGRGYDCNTHVRSTWVPALRRRERQMAVGAGGSCSGGGDSPGAKRPRALGLSQNATATSHSSNSNATTPKSLDTTSCHQDAGFKQSLPGHVRAPAVFRCHRVSAIGNGENEIAYLATVNISGHVFKGFLYDHGVEGKNAMPCASELQLGNNCSSGKNKDCSSAFGVPTNPAYSASAS* 352
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev10g0065 351 TIGRFAM put_zinc_LRP1: putative zinc finger domain, LRP1 type 153 195 IPR006510 -
Aev10g0065 351 MobiDBLite consensus disorder prediction 225 247 - -
Aev10g0065 351 MobiDBLite consensus disorder prediction 60 84 - -
Aev10g0065 351 PANTHER PROTEIN LATERAL ROOT PRIMORDIUM 1 2 350 IPR007818 GO:0003700|GO:0006355
Aev10g0065 351 MobiDBLite consensus disorder prediction 17 39 - -
Aev10g0065 351 MobiDBLite consensus disorder prediction 201 247 - -
Aev10g0065 351 TIGRFAM LRP1_Cterm: LRP1 C-terminal domain 261 308 IPR006511 -
Aev10g0065 351 Pfam Domain of unknown function (DUF702) 153 309 - -
Aev10g0065 351 PANTHER LRP1 CARBOXY-TERMINAL DOMAIN PROTEIN 2 350 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev10g0065 Aev-Chr10 589613 591446 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev10g0065 154 346 C2H2 Transcription Factor Family AT5G12330 50.505 1.32e-55 185
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF SRS Aev10g0065 DUF702 4.1e-55 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev10g0065 - - gmx:100806835 415.616