Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Aev10g0065 | ATGAGCATGTTAGGCCTGAGAGACCTAGTACTGATAGCTCCAACCCCTTCTTCCCTTCACCACCACCACCACCACCACCAGGGCCAACCCATTTCATCAGATCACAACAACAACAGTTCCAATCTCAGCGTTGGATTTGGGATCTTCCCTCTCCTTACGGCCACGCCCTGCGTCCCACAACAGCACAACAACAACAACAACAATAACAATAATGATGTTCAAGAGTGTGGCACCACCACCACCAACCCTAACCCCAACCCCAACAATTACTGGAACCTCAAGATGTGCCCTGAAGTGATGATGATGAAAAAGGGATCATCGTCGCTAGGATTGGTCAACAGCAACAACGTGGAGGAAGACGATGAAGATGATGACGGTGGGGCCCACAATAACAGGGCAGTGAATGTGATGATGATGGAGAGCGAGGAGGAACTCGGCGTTGGCGGTGAATTCAGGGTCTGTCAAGACTGTGGAAACAGGGCAAAGAAGGATTGCGTGTATAGAAGGTGCAGGACTTGTTGCAAGGGCCGTGGGTATGACTGCAACACTCACGTGAGGAGCACGTGGGTCCCTGCCCTCCGACGCCGGGAGCGCCAGATGGCAGTTGGTGCCGGTGGAAGTTGCAGCGGCGGCGGCGATTCTCCCGGAGCTAAGAGGCCGAGAGCTCTGGGGTTATCTCAAAATGCTACTGCTACCTCTCATAGTTCCAATTCTAATGCCACCACTCCTAAGAGCTTGGACACTACCTCTTGTCACCAAGATGCTGGTTTTAAACAGTCATTACCGGGTCATGTTCGTGCACCTGCAGTATTCAGGTGCCATAGAGTGTCAGCAATTGGCAATGGTGAAAACGAAATTGCATACTTGGCCACAGTAAATATTAGTGGGCATGTGTTCAAGGGGTTTCTCTATGATCATGGCGTTGAAGGCAAAAATGCAATGCCCTGTGCTTCAGAACTTCAACTTGGAAACAATTGCAGCAGTGGAAAGAACAAGGATTGCTCTTCTGCTTTTGGGGTTCCTACCAATCCTGCTTACTCTGCTTCTGCTAGCTGA | 1056 | 0.5057 | MSMLGLRDLVLIAPTPSSLHHHHHHHQGQPISSDHNNNSSNLSVGFGIFPLLTATPCVPQQHNNNNNNNNNDVQECGTTTTNPNPNPNNYWNLKMCPEVMMMKKGSSSLGLVNSNNVEEDDEDDDGGAHNNRAVNVMMMESEEELGVGGEFRVCQDCGNRAKKDCVYRRCRTCCKGRGYDCNTHVRSTWVPALRRRERQMAVGAGGSCSGGGDSPGAKRPRALGLSQNATATSHSSNSNATTPKSLDTTSCHQDAGFKQSLPGHVRAPAVFRCHRVSAIGNGENEIAYLATVNISGHVFKGFLYDHGVEGKNAMPCASELQLGNNCSSGKNKDCSSAFGVPTNPAYSASAS* | 352 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Aev10g0065 | 351 | TIGRFAM | put_zinc_LRP1: putative zinc finger domain, LRP1 type | 153 | 195 | IPR006510 | - | |
Aev10g0065 | 351 | MobiDBLite | consensus disorder prediction | 225 | 247 | - | - | |
Aev10g0065 | 351 | MobiDBLite | consensus disorder prediction | 60 | 84 | - | - | |
Aev10g0065 | 351 | PANTHER | PROTEIN LATERAL ROOT PRIMORDIUM 1 | 2 | 350 | IPR007818 | GO:0003700|GO:0006355 | |
Aev10g0065 | 351 | MobiDBLite | consensus disorder prediction | 17 | 39 | - | - | |
Aev10g0065 | 351 | MobiDBLite | consensus disorder prediction | 201 | 247 | - | - | |
Aev10g0065 | 351 | TIGRFAM | LRP1_Cterm: LRP1 C-terminal domain | 261 | 308 | IPR006511 | - | |
Aev10g0065 | 351 | Pfam | Domain of unknown function (DUF702) | 153 | 309 | - | - | |
Aev10g0065 | 351 | PANTHER | LRP1 CARBOXY-TERMINAL DOMAIN PROTEIN | 2 | 350 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Aev10g0065 | Aev-Chr10 | 589613 | 591446 | Dispersed/Transposed |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Aev10g0065 | 154 | 346 | C2H2 Transcription Factor Family | AT5G12330 | 50.505 | 1.32e-55 | 185 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
TF | SRS | Aev10g0065 | DUF702 | 4.1e-55 | No_clan |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Aev10g0065 | - | - | gmx:100806835 | 415.616 |