LGRPv2

Gene search

Sequence information

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Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Aev10g0029	ATGTCTTTTCGTGGGTTTTTCTTTTCACTTGTCTTTATCTGGGTGAATTGTTTTCGAGTAGAACTAGCAGTAGATGCTAAACAATTTTACCCAAGAAAAGGGTATAACAGAGTCTCCCCTTGTTTGACAATTATAGTGGATCCATCGGGGCATGGAAACTTCTCTACCATTCAATCTGCCATTGATTCAGTTTCCTCCAACAATAAGAATTGGGTTTGCATCAATGTGAAGGCAGGCACCTACAGGGAAAAGGTGAATATTCCGAAAGGCAAATCTTACATCATATTACAAGGAGAGGGAAAGAAGAAAACATTAGTTGACTGGGATGACCATGCTACAACCTTACAGAGCCCAACATTCTCAACTATGGCTGACAATGTTGTCGTCAAGTCCATTAGCTTTAGGAATTCATACAATGGTCCCATTATTATACCTGCAGTAGCCGCAATGGTAAGTGGTGACAAGTCTTACTTCTATAGAGTTGGTTTCTTTGGTGTTCAAGATACCTTATGGGATGATAAAGGAAAACATTACTTCGAGCTTTGTACCATCCAAGGTGCTGTTGATTTTATATTTGGCACTGGCCAGTCCTTATATGAGAGATGTTCCATATCTGTTATTGGGGCGGCCTTGCGTCCTGGAGTTAGTGGTTTTATCACAGCACAAGGGAGAACAAATGAAAGCGAAGGAAATGGGTTTGTGTTCAAGAATTGCAATATCTTTGGAAGTGGGAAAAGTTACTTAGGAAGGGCATGGAGAGATTATGCTAGAGTTATTTTCTACAATACAAGCATGTCCAACGTTATACTACCTAGTGGTTGGGATCCCTGGCACTCCTATGAACACAGGTCAGATTCTTATTCCAACTTAACTCTCACTCTCACTATATATATGCATCTCCAACACATTTAA	912	0.4013	MSFRGFFFSLVFIWVNCFRVELAVDAKQFYPRKGYNRVSPCLTIIVDPSGHGNFSTIQSAIDSVSSNNKNWVCINVKAGTYREKVNIPKGKSYIILQGEGKKKTLVDWDDHATTLQSPTFSTMADNVVVKSISFRNSYNGPIIIPAVAAMVSGDKSYFYRVGFFGVQDTLWDDKGKHYFELCTIQGAVDFIFGTGQSLYERCSISVIGAALRPGVSGFITAQGRTNESEGNGFVFKNCNIFGSGKSYLGRAWRDYARVIFYNTSMSNVILPSGWDPWHSYEHRSDSYSNLTLTLTIYMHLQHI*	304

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Annotation information

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Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Aev10g0029	303	PANTHER	PECTINESTERASE 10-RELATED	32	283	-	-
	Aev10g0029	303	PANTHER	ACYL-COA THIOESTER HYDROLASE YBHC-RELATED	32	283	-	-
	Aev10g0029	303	SUPERFAMILY	Pectin lyase-like	41	285	IPR011050	-
	Aev10g0029	303	Pfam	Pectinesterase	44	279	IPR000070	GO:0030599\|GO:0042545
	Aev10g0029	303	Gene3D	-	41	293	IPR012334	-
	Aev10g0029	303	ProSitePatterns	Pectinesterase signature 2.	184	193	IPR033131	-

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Duplication type information

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Select	Gene	Chromosome	Start	End	Duplicated_type
	Aev10g0029	Aev-Chr10	279200	283914	Dispersed/Transposed

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Functional genes information

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Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Aev10g0029	43	279	Carbohydrate Esterase	AT2G19150	47.107	3.67e-75	230

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Pathway information

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Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Aev10g0029	-		-	gmx:100819252	372.089

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