Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev10g0014 ATGACTTCCAATGGCAAGAGGCGAAATAAGCATCATGTGCCCTCTGCAATCCTTTTCTTTAGGATTATAGTTGGAAACACTCTTGAAGATGGGAAGCTTAAGCTGCCAAACAACTTCACAAGGAAATATGGTGGTGGTATGTCAAACCCTATGTTCCTCAAGCCCCCTGATGGCACAGAATGGAGAGTATGTTGGACTAAGCATGATGATGAAATTTTGCTTGAAAAGGGTTGGAAGGAGTTTGCTACATATTACTCTCTAGATCATGGAAACTTGGTGTTGTTTGAGTATAAGAAATCTTCTAATTTTGTGGTACACATATTTGGCATAAGTGGCCTTGAAATAGACTATCGTTTGAATGACAATCTTGACCATATCAATGATGAGACAATTGAAATTTTGGATGGGATGCCAATGTTTGATTCTCCTCAACCCTGTAAGAAACTCAGAATTGGCACAAGTGCAGATGGCAGAACAAGCTTTAATTTTGTAGACTTGCCTCCACTTGACCAAATTAATGGTAATCGCTCTAAAGGGACGAACCTTCATAAGTCAATGTTTGCATCTGACAATGAAAAATTGGATGAGGATATAGGTGGTATCACTCAATGTCCAGAAGTGGAGCAACCTACTAAATTAACTGAAGCATTGAACAGAGACAGAACTTTGAGATTGAAGATTCCCTCTTTCATGGTTGTCATGACACCTTCTTATGCTAGTAACAATTCTGTGAGTATCCCTTCAAGATTTGCAAAAGAACATTTGAAGGGAAAGAAAGGGGCTACCCTCCTTCAGGTGCAGGATGGGAGAAGTTGGTCTGCTATTTATAATTTAGGAAACATATATTCTGGTTGGAAGAGATTTGCATCAGATAATAATTTGAAAGTTGGGGATATTTGTGTTTTCGAGCTTATCGATCTCAAAGGCCTTTCCTTTAAAGTATCAATATCTCGAGCTGCTGCAAAAGAACCAAATTGCTCTGAGTCACAAGAAACGGATCAAGAAGACAGAGTCAAGCTGTTAGACCCCGGAAGAGTCCAGTATACTGGATGTCGAAAGGCAACTCAAAAAAATACACTAGTGATTAGTCCTGACTCCGGCACAAATGAAGCTATGAAAGAAGCAGAGAAATTCACCTCGGAAAATCCCTTTTTCATGGTCTCTATAAAGCGCAACTTTCTTGTGTCATGGAAACCGGTTGTACCGGCTGCCTTCATCAAGAAGTACCTGGGTAAGAAAAAACAGATTCTGACATTACAGATTGGGAATAAATCGTGGCATGTAACGTTGCTGTGCTATGCATACAATACTCCAAGCAAGTTTTCCGATGGTTGGCTCGTATTTGTTAGAGAAACTGAACTGCAAGTTGGAGATGTTTGTATCTTTGAGCTCATTAACAGAGAGGGTGCAGTGTTTGATGTTCACATTTTCAGATGCCAGTACTAG 1446 0.399 MTSNGKRRNKHHVPSAILFFRIIVGNTLEDGKLKLPNNFTRKYGGGMSNPMFLKPPDGTEWRVCWTKHDDEILLEKGWKEFATYYSLDHGNLVLFEYKKSSNFVVHIFGISGLEIDYRLNDNLDHINDETIEILDGMPMFDSPQPCKKLRIGTSADGRTSFNFVDLPPLDQINGNRSKGTNLHKSMFASDNEKLDEDIGGITQCPEVEQPTKLTEALNRDRTLRLKIPSFMVVMTPSYASNNSVSIPSRFAKEHLKGKKGATLLQVQDGRSWSAIYNLGNIYSGWKRFASDNNLKVGDICVFELIDLKGLSFKVSISRAAAKEPNCSESQETDQEDRVKLLDPGRVQYTGCRKATQKNTLVISPDSGTNEAMKEAEKFTSENPFFMVSIKRNFLVSWKPVVPAAFIKKYLGKKKQILTLQIGNKSWHVTLLCYAYNTPSKFSDGWLVFVRETELQVGDVCIFELINREGAVFDVHIFRCQY* 482
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev10g0014 481 CDD B3_DNA 18 108 IPR003340 GO:0003677
Aev10g0014 481 CDD B3_DNA 384 478 IPR003340 GO:0003677
Aev10g0014 481 Pfam B3 DNA binding domain 28 108 IPR003340 GO:0003677
Aev10g0014 481 Pfam B3 DNA binding domain 400 478 IPR003340 GO:0003677
Aev10g0014 481 Pfam B3 DNA binding domain 230 319 IPR003340 GO:0003677
Aev10g0014 481 Gene3D - 15 112 IPR015300 -
Aev10g0014 481 SMART B3_2 230 320 IPR003340 GO:0003677
Aev10g0014 481 SMART B3_2 19 111 IPR003340 GO:0003677
Aev10g0014 481 SMART B3_2 385 480 IPR003340 GO:0003677
Aev10g0014 481 SUPERFAMILY DNA-binding pseudobarrel domain 17 111 IPR015300 -
Aev10g0014 481 Gene3D - 365 481 IPR015300 -
Aev10g0014 481 Gene3D - 210 321 IPR015300 -
Aev10g0014 481 PANTHER B3 DOMAIN-CONTAINING 336 479 - -
Aev10g0014 481 PANTHER B3 DOMAIN-CONTAINING 11 319 - -
Aev10g0014 481 ProSiteProfiles B3 DNA-binding domain profile. 384 480 IPR003340 GO:0003677
Aev10g0014 481 PANTHER TRANSCRIPTION FACTOR B3-DOMAIN FAMILY-RELATED 336 479 - -
Aev10g0014 481 PANTHER TRANSCRIPTION FACTOR B3-DOMAIN FAMILY-RELATED 11 319 - -
Aev10g0014 481 SUPERFAMILY DNA-binding pseudobarrel domain 225 318 IPR015300 -
Aev10g0014 481 CDD B3_DNA 228 318 IPR003340 GO:0003677
Aev10g0014 481 SUPERFAMILY DNA-binding pseudobarrel domain 378 478 IPR015300 -
Aev10g0014 481 ProSiteProfiles B3 DNA-binding domain profile. 229 320 IPR003340 GO:0003677
Aev10g0014 481 ProSiteProfiles B3 DNA-binding domain profile. 18 111 IPR003340 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev10g0014 Aev-Chr10 138512 141946 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev10g0014 319 479 B3 DNA Binding Superfamily AT3G18990 30.247 2.69e-13 69.3
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF B3 Aev10g0014 B3 9.4e-11 CL0405
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev10g0014 - - adu:107471690 452.595