Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev10g0012 ATGGCTTCCTGCAGCTTCCAACCAAACACGCAGTCTCCTGTCACTACTGCCCGTTTCTTTAAGATTATTCTAAGGAAAACTCTTGAAGATGGAAATCTTAAAGTTCCAAACAATTTCACTAGGAAATATGGCGGTGGTTTGCAAAATCCTGTGTATCTCAACCCTCCAGATGGTACTGAGTGGGAGGTTCATTGGACTAAGCATGATGAGGGGATTTTGTTTCAAAAGGGTTGGAAGGAATTTGCTGCATATTATTCACTAGATCATGGACACTTGGTGGTGTTTCAGTACAAGGAAACTTCACATTTTGAACTACACATATTTGGCATGAATGGCCTTGAAATAGACTATCCTAATGATATGGTTGACATTTTGAATGAGCCAAGCCCAAGTGAGGGCCAGAAGAGAAGACTTAAGTCACCATTGCTGTTGTCTCCTTCTACAAGTGAGAAATTGAGATCTTCAGTTAGAACAATCCCCAATCCAGAAATTAGTCAATCTGAAGACATAAAGCCTGAGTTGCCAATAGTTGCAACTGTCAATCAACATATGCCCGGCAAGAAAAATAGAAGAAAACAAGATCCTAAACCTCTCATTAGTCTCTTCCCTGCAACGTCTGAAGCACTGGAAGAAGCCAAGAAGTTCAACTCAAAAAATCCCTCTTTCATAGTCAAGATATTGCCATCTCATCTGACGCGAAGACTTTGTCCCCACTTCTCAGTTATCTTCTTCAGAAAGTATTTTAAACAGGATAGGCAGTATGTGAAGATACGGTTCAAAAAGAAGTTGTTTCCTGCAAGGTTGATCTATTATTCGTACAAGTGTACTGCTGTTATTTCCGCAGAGGTTAATCTATCCATTAGAGCTTCAGGAGCTCTTAGACCAAGTAACTCTGAAAACTTGTCACTTTTCTTTGCTAAAATCGAACTTCTATTGTAG 939 0.3983 MASCSFQPNTQSPVTTARFFKIILRKTLEDGNLKVPNNFTRKYGGGLQNPVYLNPPDGTEWEVHWTKHDEGILFQKGWKEFAAYYSLDHGHLVVFQYKETSHFELHIFGMNGLEIDYPNDMVDILNEPSPSEGQKRRLKSPLLLSPSTSEKLRSSVRTIPNPEISQSEDIKPELPIVATVNQHMPGKKNRRKQDPKPLISLFPATSEALEEAKKFNSKNPSFIVKILPSHLTRRLCPHFSVIFFRKYFKQDRQYVKIRFKKKLFPARLIYYSYKCTAVISAEVNLSIRASGALRPSNSENLSLFFAKIELLL* 313
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev10g0012 312 SUPERFAMILY DNA-binding pseudobarrel domain 16 111 IPR015300 -
Aev10g0012 312 Pfam B3 DNA binding domain 20 107 IPR003340 GO:0003677
Aev10g0012 312 SMART B3_2 19 111 IPR003340 GO:0003677
Aev10g0012 312 PANTHER B3 DOMAIN-CONTAINING 12 261 - -
Aev10g0012 312 CDD B3_DNA 18 108 IPR003340 GO:0003677
Aev10g0012 312 ProSiteProfiles B3 DNA-binding domain profile. 18 111 IPR003340 GO:0003677
Aev10g0012 312 PANTHER TRANSCRIPTION FACTOR B3-DOMAIN FAMILY-RELATED 12 261 - -
Aev10g0012 312 Gene3D - 204 284 IPR015300 -
Aev10g0012 312 Gene3D - 12 112 IPR015300 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev10g0012 Aev-Chr10 116118 118408 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev10g0012 19 270 B3 DNA Binding Superfamily AT3G18990 26.712 8.98e-24 98.2
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF B3 Aev10g0012 B3 5.7e-14 CL0405
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev10g0012 - - ahf:112717097 251.906