Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev10g0007 ATGACTGGTGGGGACTGCGAAACCCCTTGGATTCTTCCTGCACCCCAATGGTCGGCTCCTGCTATTTCCAAAATCCCCCTCACACTTCCCCCAATTTACGCTTCACGCCCTTTCCAACCCAAACCAAACAACAAGTTGAGGACAGCAAGCAATAACATCAACTTCAACAAGAAACCCCAACCCATCCCCAAAACAAATGATGCATCTTTCTCACTATTTCTCTCTCAGATCCCTTCTCTTAAAATGGAAAAGGTGGCTCCGCCAATCTTCATGCACCAATCACTCACGAGTCGGTTCTGTGATCCACCATCGAAGAAGCGCGATCTGTCGTACGACGTCGTTCAGCGGAACCCAAGCGACAACTGGAACCCTAACACATGGAGCTGGGACAGTGTCAGATTCCTCGGCAAACCCTTACCCTCCCCGCAGCAAAACGCGGTCGTTTCAGCTCCCAACAACAACAACAATAACGAAGGTGAAGACGAAACGCTCCGTTTAAATCTGGGTAGCGGTGGTGGTGGTGACCCAAACGGCAACGCGCCACGCCCTAACAAGAGGGTGCGTGCTGGGTCTCCGACCGGAACGGCGTCGTATCCGATGTGCCAGGTGGATAACTGCAAGGAAGATCTCTCCAACGCGAAAGACTATCACAGACGCCACAAAGTTTGTGAACTTCACAGCAAAGCCTCCAAGGCACTCCTTGGAAACCAAATGCAAAGGTTCTGCCAGCAGTGTAGCAGGTTTCACCCTCTGTCGGAATTTGATGAAGGGAAACGAAGCTGTAGGCGTAGACTTGCCGGGCATAATCGTCGGAGAAGAAAATCCCAGCCGGAAGATGTTACATCGCAGCCAGAGAACGTGGCTTGTGGAAATGTGGAAATTTTCAACTTGTTGAGTGCAATAGCAGGTTCGCAAGGAAAGCCTGAGGAAAGAGGCAAGATTGCCCCTCAAATTCCAGATAAAGAGCAACTTGTGCAGATTCTTAATAGGATACCTTTGCCGGCTGATCTTACAGCGAAGTTGCTCAATGTTGGTAACTTTAGTGGTAAAGGTCATGTGCAACCTTCACCTTATCATCATGACAAGGTGAACCAGAGCAATTCTGGCCCACTAACTAAGGACTTACTTGCTGTTCTTTCAACCACTCTGTCGGCATCCCCTCCCAATGGCATTGCATCTGACTCTCAAAAAAGTATCCAGAGTAGTGACAGTGAGAAGTCTAGGATAAGCGCCGATGACCAAATTGGTGACAGTTTACAAATGAGACAACTGCCGCAAGAGTTCACATCTGTTGGAGATGAAAGAAGTAGTGGCAGTTCACAATCACCAGTTGTAGATTCGGGCTGTCCAGAAGTTCGAGTTAGCTTACCACTGCAACTGTTTAGCTCTTCGCCTGAAGATGGAAGGATACCAAAATTGGCACCTTCACAAAAATATTTCTCATCTGACAGCAGTAACCCTGTGGAAGAGAGGTCACCATCACCATCTCATACTGTTTTGGAGAAGCAATTTGATTCACCGGGTGTGACTAGAGGCCTCAACACCAGCAGCATTCCAAGCAGAAGAGAAGTCAATACAAATAAAGAAGCTAGCCAAAGTCATAGTTGTAATATCTCACTCGATCTCTTCAATGGGTCAAATTGCAGAGTCCAACCTAGTTCACTTCATAGTATTCCATTTCAAGCTGGGTATGCATCTTCGGGATCTGATCATTCACCTCCCAGTTTGAATTCAGATGCCCAGGATCGTACTGGGAGAATAATGTTTAAACTATTTGACAAGGATCCTAGCCATTTCCCAGGAACACTACGAACACAGATTTATAATTGGCTTTCTAATAGGCCATCAGACATGGAGAGCTACATAAGGCCTGGCTGTGTGGTATTATCAATTTATGCTGCAATGTCTTCTGCTGCCTGGGAGCAACTTGAAGAAAACTTCCTTCAACATGTCCATTCTTTAATTCAAAGCGCTGATTTTGATTTTTGGAGAAATAGAAGGTTTCTGGTTCATTCTGGCAATCAGTTAGCATCGCACAAAGATGGGAAAATTCACTTATGCAAACCATGGAGAACATGGAGGTCTCCAGAGTTGATATCAGTGTCGCCTTTGGCAATCGTTAATGGACAAGAGACCTCTCTTTTAGTGAAGGGTAGAAACCTGTCAACTCCTGGCACCAAGATTCATTGTGCAGGTACTGGATGTTACACCAATGTGGAAGTTATTGGATCTGCATATCATGGTATGACCTACGATAAGATAAAACTGAGTGGTTTTAAAGTTCAGAATGCATCTTCTGGTGTTTTGGGTCGCTACTTCATTGAGGTTGAAAATGGTTTCAAGGGTAACAGCTTTCCAGTGATAATAGCTGATGCTACCATTTGCAAGGAATTGAAACCACTTGAATCTGAATTTGATACAGAAGAAAAAATATGTGATGCCAGTTCAGATGAGCATGATTATGATCTCGGAAGGCCTAGAACGAGGGAGGAGGCTCTGCACTTCCTAAATGAGCTTGGATGGCTGTTTCAAAGGGAAAGGTTCTCAGATATGCATTTGGTTCCAGATTATTCGCTTGACAGATTCAAATTTCTACTCACATTTTCTGTGGAAAGAAATTGTTGCATGCTGGTCAAAACCCTTCTTGATATTGTGGTTGATAAACACTTTCAAGGTCAATGGTTGTCAACTGCATCCGTGGAGATGCTCAATGCAATCCAACTCTTAAATAGAGCAGTAAAAAGGAAGTATACAAACATGGTTGATATGCTCATCCACTATGCTGTGCCTACCAAAAGTGACGCATCCAGGAAATATGTATTTCCACCAAATCTTGAGGGCCCTGATGGTATTACACCCTTGCACTTGGCAGCATGCACATCATGCTCTGAGGGTATAATAGACTCCTTAACAAATGACCCGCAGGAGATTGGGTTGAACTGCTGGGAAACCCTTGTGGATGCAAATGGGCAGACACCGCATGCCTATGCCGTGATGAGGAATAACCACTCCTATAATGTGCTGGTTGCCCGTAAACTTGCTGATAGAAGAAGAGATCAAGTTTCAGTAACAATTGAAAATGAGATAGAGCAACCATCATTGAGAATTGAGCTGAAGCAAAGGCAAAGTGACCAAATCAAAAGAAGTCAGAACTCTTGTGCTAAGTGTGCGATTGCAGAAGTTCCCTTCAACAGGCGAGTTCCAGGTTCACATGGTTCTCGTCACAGACCCTTCATTCATTCCATGCTAGCTATTGCTGCTGTGTGCGTATGTGTTTGTCTGTTCTTGCGTGGACGCCCTTGCGTCGGCTCAGTTTCTCCCTTCAGTTGGGAAAATTTGGATTATGGCACAATGTAG 3357 0.4516 MTGGDCETPWILPAPQWSAPAISKIPLTLPPIYASRPFQPKPNNKLRTASNNINFNKKPQPIPKTNDASFSLFLSQIPSLKMEKVAPPIFMHQSLTSRFCDPPSKKRDLSYDVVQRNPSDNWNPNTWSWDSVRFLGKPLPSPQQNAVVSAPNNNNNNEGEDETLRLNLGSGGGGDPNGNAPRPNKRVRAGSPTGTASYPMCQVDNCKEDLSNAKDYHRRHKVCELHSKASKALLGNQMQRFCQQCSRFHPLSEFDEGKRSCRRRLAGHNRRRRKSQPEDVTSQPENVACGNVEIFNLLSAIAGSQGKPEERGKIAPQIPDKEQLVQILNRIPLPADLTAKLLNVGNFSGKGHVQPSPYHHDKVNQSNSGPLTKDLLAVLSTTLSASPPNGIASDSQKSIQSSDSEKSRISADDQIGDSLQMRQLPQEFTSVGDERSSGSSQSPVVDSGCPEVRVSLPLQLFSSSPEDGRIPKLAPSQKYFSSDSSNPVEERSPSPSHTVLEKQFDSPGVTRGLNTSSIPSRREVNTNKEASQSHSCNISLDLFNGSNCRVQPSSLHSIPFQAGYASSGSDHSPPSLNSDAQDRTGRIMFKLFDKDPSHFPGTLRTQIYNWLSNRPSDMESYIRPGCVVLSIYAAMSSAAWEQLEENFLQHVHSLIQSADFDFWRNRRFLVHSGNQLASHKDGKIHLCKPWRTWRSPELISVSPLAIVNGQETSLLVKGRNLSTPGTKIHCAGTGCYTNVEVIGSAYHGMTYDKIKLSGFKVQNASSGVLGRYFIEVENGFKGNSFPVIIADATICKELKPLESEFDTEEKICDASSDEHDYDLGRPRTREEALHFLNELGWLFQRERFSDMHLVPDYSLDRFKFLLTFSVERNCCMLVKTLLDIVVDKHFQGQWLSTASVEMLNAIQLLNRAVKRKYTNMVDMLIHYAVPTKSDASRKYVFPPNLEGPDGITPLHLAACTSCSEGIIDSLTNDPQEIGLNCWETLVDANGQTPHAYAVMRNNHSYNVLVARKLADRRRDQVSVTIENEIEQPSLRIELKQRQSDQIKRSQNSCAKCAIAEVPFNRRVPGSHGSRHRPFIHSMLAIAAVCVCVCLFLRGRPCVGSVSPFSWENLDYGTM* 1119
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev10g0007 1118 MobiDBLite consensus disorder prediction 386 449 - -
Aev10g0007 1118 MobiDBLite consensus disorder prediction 463 531 - -
Aev10g0007 1118 PANTHER SQUAMOSA PROMOTER-BINDING-LIKE PROTEIN 4 110 1118 IPR044817 GO:0003677
Aev10g0007 1118 MobiDBLite consensus disorder prediction 386 405 - -
Aev10g0007 1118 MobiDBLite consensus disorder prediction 265 285 - -
Aev10g0007 1118 MobiDBLite consensus disorder prediction 413 446 - -
Aev10g0007 1118 PANTHER SQUAMOSA PROMOTER-BINDING-LIKE PROTEIN 14 110 1118 - -
Aev10g0007 1118 MobiDBLite consensus disorder prediction 142 163 - -
Aev10g0007 1118 Gene3D - 192 262 IPR036893 GO:0003677|GO:0005634
Aev10g0007 1118 Gene3D - 855 1044 IPR036770 -
Aev10g0007 1118 SUPERFAMILY SBT domain 199 279 IPR036893 GO:0003677|GO:0005634
Aev10g0007 1118 SUPERFAMILY Ankyrin repeat 908 1004 IPR036770 -
Aev10g0007 1118 MobiDBLite consensus disorder prediction 477 531 - -
Aev10g0007 1118 Pfam SBP domain 201 274 IPR004333 GO:0003677
Aev10g0007 1118 MobiDBLite consensus disorder prediction 138 194 - -
Aev10g0007 1118 ProSiteProfiles Zinc finger SBP-type profile. 198 275 IPR004333 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev10g0007 Aev-Chr10 65761 72011 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev10g0007 84 1118 SBP-box Gene Family AT1G20980 52.533 0.0 980
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF SBP Aev10g0007 SBP 6e-30 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev10g0007 - - lang:109360589 1484.54