Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev10g0004 ATGGCATCGAATAATCCTTATGAAGTCATGGACGATGACGAGGGTTTTGATTGGGAAGCAGCTGCAAGCGAAATCGACGTCGTTTGCCAACGGAACAAGGCTGGCAGTGACACGTACGCGAATGGAAAGGGATCCGCCACATGCCGGCAATCCACTCTTGATAAGTTTGTGGTTTCTTCGAAGAAGGAAACCCCAATGCCTCAGCCTCAGTTCCAAGATGAAGCTGAAGCCGAAGGCCCCACCTGCATCCACCACATTGACGCCGACGCGGCCAAAACTTGGATATACCCAGTTAATGTACCTCTCCGTGACTATCAATTTGCTATTACCCAGTCCGCACTCTTTTCAAACACATTGGTCGCCTTGCCAACAGGACTTGGCAAAACACTCATTGCTGCCGTTGTTATGTATAACTACTTCAGATGGTTTCCTCAAGGAAAAATAGTCTTTGCTGCTCCTTTCCGGCCACTTGTCATGCAGCAGATAGAAGCATGCCATAATATTGTGGGAATACCTCAAGAATGGACAATCGATATGACTGGTCAACTGAGTCCTCCCAAAAGTGCTTGTTTTTGGAAAACAAAGCGAGTTTTCTTTGTCACTCCACAAGTGTTAGAGAAGGATATTCATTCTGGTACATGTTTGGTGAAGAACTTGGTATGTTTAGTTATTGATGAAGCTCACAGAGCGATGGGAAATTACTCTTATTGTGAAGCAGTTCGTGAGGTTGCAATGGGCCAAGATGCTGTGGAAATAAACAATAAGTTTCTGGAAGTCATACGGCCAATAGTAGCCAGGCTTAATGATATTGGGGTCATTCAGAATAGAAATTATCGCACTTTGAGCCCTTGTGTGTTACTTGAAATAAGGGAAAAGTTTCGACAAGGACCTAGGCAAGATCTTTCTCATGGTAACTATCAAGATATTGAAGGCTATTTTGGAGTTCTTATCACTCTTTATTACATCCATAAGCTACTTTCAAGTCACGGAATAAGGCCAGCATGTGAAATGCTTGAAAGAAAATTGAAGCAAGGATTTTTTGCAAAATTTATGAGTAAAAATGATAATATTCTGAAAGCAAGACAACTGATGCAGCAAAGCTTGTCTCATGGAGCATCTAGTCCCAAGCTCTCCAAAATGCTAGAAGTATTACTGGAGCATTTCAGAACTTCTGGCCAAATTGAAGATTTTCATGTGATAACACATGTTCAGGGACATAATGGGTGCACTGGAGATATTGGAGAACCAGTCAGAGCTACCCAGTTTATTGGTCAAAGTTCAGGGAAAGCAATGAAAGGTCAGTCCCAAAAAGTTCAACAGGCTGTGCTGAAGAAATTTCGGTCAGGTGCCTACAATGTCATTGTTGCTACATCAATTGGTGAAGAAGGTCTTGATATCATGGAAGTTGATCTTGTCATATCTTTCGATGCCAATATTTCACCACTTAGAATGATTCAGCGAATGGGGAGAACTGGAAGAAAACATGATGGCAGAGTTGATATCCTTTGGGCACCACCAGTTTTATGTCTATTGGCAATTATACCCCACGTCTTTAAACCCGAAGTTCAATATGTTGAGCTATCAATTGAGAAATTTATTCCTCGTGAAAAGATAGTGAGAGATGACCCTCTTCAGATTTCTCCGCCCAAGAACAAACTCACCGTTGCTGAAATTGATTTACTTGGAACATATTTTGACTCCACTGGGGGAAATACTTGTAGATTGTCTCTTGTTGCTTTTCCTCACTTTCAGACCTTCCCTTCTAGAGTGCATGAAGTGAAGCATTCCCGTGGAACAAAGATGCTTATAGACATGATGCAGCGTTTGCAAGGACTAGTATCATCTCGAAGAGATAGCAAAACTTCTTGTCAGGAAGTTCCGTGTTTAGGAAATACCAAGCCATTTGCAATTATCGCACTTGATGAAGCTAAACATGACAATGAGTCATGCTCTAGGCACACAATGGACAGGAATGCAGTCACTGTAAATTCTATGGAGTTGGATTCATGTCTTTTGGGGATTCAAACCAATGACTCCATTGATCTAACCGTACAAGACAGTGTTTTCAGTGACTTGGGGAAGCATCAAGAGGAAACTTTCGAGGTTGATGAGACAGTTCCTGAGACTCCAATTGCTAAAAGAAGTGGGTCAAATGGAGGAGATAATGCTGGTGAAAAGGCCAATCTTGTAGAGGTCAAGCCTTCATTGTTGCTGGCAGAGGTATGCATTAATGGCGTGAGAGATGAAGAACTCAGTCCTCGATTAACTAATTTCATTAAAAGTGGTGTTGTTCCAGAGTCTCCTCCCATTGATGGAAGAGAGAAACCAAGAGTCAAGTTTGTCATTAGAGACTGTATTTTGCCTGTTCATCTCCAGGAAGAACAGGATAATGGTTCTTTGAGTTGTAGGGAAACTGAAAAGCTCATGATTGATGGTGGCACTGGTAATAATGTCTCTAGTTCTCCTGTGGATAGTGGAACCCAAACCCCTTTACTTGAGCTGAAGAATTGTGCAATTAGTAGGAAGCACGTCTTTATTTCTCCAACTGAAGAAGGGCATTCACATATGTCTGACTCAAGCTTCAGTGAAGAATCTCGTTTAGGCTCTTGTAAAATGTCTGCAAGTGTTCAACCTGTGCGCAAATTAAAGAGATTGCGGAAAGCTGTAGATAGTGAGAGCAATGTGAATCAGAAGAACAATAGTACTTTCGCTTCAACAGCAAACCTTTTGAAATCATCCTCTTTGTCCATTCCCGCACGATATAAGCATGACCGAGGTAAAAGGAAATCAACGCATGATGTGAGAGACTTTATTGAGGAGGAAGCTGAGGTATCTTCAGAAGCCTATGTATCTAGTGACGAAGATGATGAGGATGGCAATTCATTTGACAATTTCATAGATGACAGGATAAACCCTACAGCGCCCAGTCAGCCTGAATTTAGTAGAGTGGACATGATGTCAATTTACAGGCGTTCTTTGCTCAGTCAAACAACACCTGTGGACGCCCATGCGACTCTGACAGCGGCGAGTATTAGTGAGAGTGGGGAGAGCCATGCTCAGACAGAAGCAGCTAATAGGACTTGTGAATCGGTGGTTCATATCAGGACTTGTGAATCGGTGGTTCATATCAACCGCATAACCCCTGAAGCTAGCACAACAGAGATTACAAGTCGTAAAAGAAGGTTGACATTTTATCATTCAGGACACTTTCCAAATATGAAGAACCTTGAACAAGAATTCGCACTTGAAACAAACAAGGAAACGGTGGATGCCGATGCGACTTCAGATGTTCTATTTGATGATCATTTTTTTAACGACCTTGATCTTGACGAGTTGGAGGCACAAGCAACCTCGCTTCTTAGAAAGAAATTAGATTTGTCAAATCAGAAGCCTCAGCCTCACTCTCCGAAGCTCCATTGTCTTACGTCTCCATCTTTTGATCTTGGGATATAA 3453 0.4214 MASNNPYEVMDDDEGFDWEAAASEIDVVCQRNKAGSDTYANGKGSATCRQSTLDKFVVSSKKETPMPQPQFQDEAEAEGPTCIHHIDADAAKTWIYPVNVPLRDYQFAITQSALFSNTLVALPTGLGKTLIAAVVMYNYFRWFPQGKIVFAAPFRPLVMQQIEACHNIVGIPQEWTIDMTGQLSPPKSACFWKTKRVFFVTPQVLEKDIHSGTCLVKNLVCLVIDEAHRAMGNYSYCEAVREVAMGQDAVEINNKFLEVIRPIVARLNDIGVIQNRNYRTLSPCVLLEIREKFRQGPRQDLSHGNYQDIEGYFGVLITLYYIHKLLSSHGIRPACEMLERKLKQGFFAKFMSKNDNILKARQLMQQSLSHGASSPKLSKMLEVLLEHFRTSGQIEDFHVITHVQGHNGCTGDIGEPVRATQFIGQSSGKAMKGQSQKVQQAVLKKFRSGAYNVIVATSIGEEGLDIMEVDLVISFDANISPLRMIQRMGRTGRKHDGRVDILWAPPVLCLLAIIPHVFKPEVQYVELSIEKFIPREKIVRDDPLQISPPKNKLTVAEIDLLGTYFDSTGGNTCRLSLVAFPHFQTFPSRVHEVKHSRGTKMLIDMMQRLQGLVSSRRDSKTSCQEVPCLGNTKPFAIIALDEAKHDNESCSRHTMDRNAVTVNSMELDSCLLGIQTNDSIDLTVQDSVFSDLGKHQEETFEVDETVPETPIAKRSGSNGGDNAGEKANLVEVKPSLLLAEVCINGVRDEELSPRLTNFIKSGVVPESPPIDGREKPRVKFVIRDCILPVHLQEEQDNGSLSCRETEKLMIDGGTGNNVSSSPVDSGTQTPLLELKNCAISRKHVFISPTEEGHSHMSDSSFSEESRLGSCKMSASVQPVRKLKRLRKAVDSESNVNQKNNSTFASTANLLKSSSLSIPARYKHDRGKRKSTHDVRDFIEEEAEVSSEAYVSSDEDDEDGNSFDNFIDDRINPTAPSQPEFSRVDMMSIYRRSLLSQTTPVDAHATLTAASISESGESHAQTEAANRTCESVVHIRTCESVVHINRITPEASTTEITSRKRRLTFYHSGHFPNMKNLEQEFALETNKETVDADATSDVLFDDHFFNDLDLDELEAQATSLLRKKLDLSNQKPQPHSPKLHCLTSPSFDLGI* 1151
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev10g0004 1150 Gene3D - 371 506 IPR027417 -
Aev10g0004 1150 PANTHER FANCONI ANEMIA GROUP M PROTEIN 243 500 IPR039686 GO:0006281|GO:0043138
Aev10g0004 1150 PANTHER FANCONI ANEMIA GROUP M PROTEIN 703 1119 IPR039686 GO:0006281|GO:0043138
Aev10g0004 1150 CDD FANCM_ID 250 364 - -
Aev10g0004 1150 ProSiteProfiles Superfamilies 1 and 2 helicase C-terminal domain profile. 376 533 IPR001650 -
Aev10g0004 1150 PANTHER FANCONI ANEMIA GROUP M FANCM FAMILY MEMBER 15 243 - -
Aev10g0004 1150 CDD DEXDc_FANCM 100 243 IPR044749 GO:0005524
Aev10g0004 1150 ProSiteProfiles Superfamilies 1 and 2 helicase ATP-binding type-1 domain profile. 109 245 IPR014001 -
Aev10g0004 1150 Pfam Helicase conserved C-terminal domain 433 494 IPR001650 -
Aev10g0004 1150 SMART ultradead3 98 273 IPR014001 -
Aev10g0004 1150 Gene3D hef helicase domain 252 370 - -
Aev10g0004 1150 SMART helicmild6 378 495 IPR001650 -
Aev10g0004 1150 MobiDBLite consensus disorder prediction 1127 1150 - -
Aev10g0004 1150 PANTHER FANCONI ANEMIA GROUP M FANCM FAMILY MEMBER 243 500 - -
Aev10g0004 1150 PANTHER FANCONI ANEMIA GROUP M FANCM FAMILY MEMBER 703 1119 - -
Aev10g0004 1150 Coils Coil 1109 1129 - -
Aev10g0004 1150 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 117 506 IPR027417 -
Aev10g0004 1150 PANTHER FANCONI ANEMIA GROUP M PROTEIN 15 243 IPR039686 GO:0006281|GO:0043138
Aev10g0004 1150 Gene3D - 99 251 IPR027417 -
Aev10g0004 1150 PANTHER FANCONI ANEMIA GROUP M PROTEIN 512 627 IPR039686 GO:0006281|GO:0043138
Aev10g0004 1150 PANTHER FANCONI ANEMIA GROUP M FANCM FAMILY MEMBER 512 627 - -
Aev10g0004 1150 Pfam Type III restriction enzyme, res subunit 116 238 IPR006935 GO:0003677|GO:0005524|GO:0016787
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev10g0004 Aev-Chr10 33904 47504 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev10g0004 436 509 Eukaryotic Initiation Factors Gene Family AT3G13920 30.233 7.87e-07 51.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev10g0004 K10896 - gmx:100820078 1294.64