Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev09g2855 ATGTATCCTTCTTCTACGTCGTCGTCGTCGTGTCAGTCCCACAACTCCACCATCTCAGAAACCGGCTTGACCCGCTTCGGCTCCGCTCCTGGATCTCTCCTCAGGACTGCCGTCGATGCCGTCATAGGCCCTCTCGGCGTGGGGATTGGCGGCCACTACTTCATGGGCGAGTCCTCCGACTCCCCCTGCAAAGTCAACAACTCCGATCCCAAAGACCACCACCACAAGGGAGGCGGAGGAGGAGGAGGAGGACCCCTCCTCCAGAGATCGTACGGACTCCAGGAGGCATTCGGCGAAGGAGGATCTTCCTCCTCCTCCTCTTCGTTGCTCCGCCAGAGGAGCTCCCCCGCCGGCTTCCTCAATCATCTCGCCACCTCTGCACATCTTCATGACGCCACCCATCCTGGGTTCACGATCACGAGGGGGAGCGGAAGCTACGGGTCTAATAATAGTGGGGTAGGAAGGTTGAAGTCGCAATTGAGCTTCACGGGGCATGACTCTCTGACTCAGATATCAGAGGTGAGCGAGAATAATCATAATCATAATCATAATCATGTGGTGGATGCCTCCACTTCTGAGCACAGATCATCCACTCATGCTCATGCTCATGCTCATGCTCATGGCTACGGGTCGTCCTCGTCTTCGTTTTCAATAGACCCTTGGGACACCTCCAACAACTCCATCGTCTTCTCTGCTCCTCCGCCCACCAAGCGCTCCAAAAGCAGCAGCATCGATGGGGACATTCTCAACTGTCTCTCTGCCTTGGACTCTCAGTTTAGTCTGCCCCAAACAAGTCTGGAAATGGCAACCATGGACAAGCTTATGCATATTCCTGAAGACTCTGTCCCTTGTAAAATCCGTGCTAAGCGAGGCTGTGCCACTCATCCTCGCAGCATTGCTGAACGGGAGAGAAGAACTAGAATAAGTGGGAAGCTCAAAAAACTACAGGAGCTTGTGCCCAATATGGATAAGCAAACCAGCTATGCAGACATGCTTGATTTGGCCGTTCAACATATTAAAGGTCTTCAAACTCAAGTCCAGAAGCTTCACAAAGAACTTGAGAATTGCACTTGTGGATGCAAACCAAGCACATAG 1095 0.5279 MYPSSTSSSSCQSHNSTISETGLTRFGSAPGSLLRTAVDAVIGPLGVGIGGHYFMGESSDSPCKVNNSDPKDHHHKGGGGGGGGPLLQRSYGLQEAFGEGGSSSSSSSLLRQRSSPAGFLNHLATSAHLHDATHPGFTITRGSGSYGSNNSGVGRLKSQLSFTGHDSLTQISEVSENNHNHNHNHVVDASTSEHRSSTHAHAHAHAHGYGSSSSSFSIDPWDTSNNSIVFSAPPPTKRSKSSSIDGDILNCLSALDSQFSLPQTSLEMATMDKLMHIPEDSVPCKIRAKRGCATHPRSIAERERRTRISGKLKKLQELVPNMDKQTSYADMLDLAVQHIKGLQTQVQKLHKELENCTCGCKPST* 365
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev09g2855 364 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 292 342 IPR011598 GO:0046983
Aev09g2855 364 MobiDBLite consensus disorder prediction 178 211 - -
Aev09g2855 364 MobiDBLite consensus disorder prediction 1 25 - -
Aev09g2855 364 CDD bHLH_AtbHLH_like 297 349 IPR045239 -
Aev09g2855 364 PANTHER TRANSCRIPTION FACTOR BHLH83-RELATED 22 357 - -
Aev09g2855 364 MobiDBLite consensus disorder prediction 178 199 - -
Aev09g2855 364 PANTHER TRANSCRIPTION FACTOR BHLH129 22 357 - -
Aev09g2855 364 MobiDBLite consensus disorder prediction 59 89 - -
Aev09g2855 364 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 295 357 IPR036638 GO:0046983
Aev09g2855 364 Pfam Helix-loop-helix DNA-binding domain 297 343 IPR011598 GO:0046983
Aev09g2855 364 Gene3D - 293 359 IPR036638 GO:0046983
Aev09g2855 364 SMART finulus 298 348 IPR011598 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev09g2855 Aev-Chr9 28733202 28735284 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev09g2855 22 363 Basic Helix-Loop-Helix Transcription Factor Gene Family AT1G05805 47.396 5.25e-85 260
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Aev09g2855 HLH 5.1e-09 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev09g2855 - - jre:108987327 340.502