Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev09g2851 ATGAGGCTGGCTGGCTCAGCTGCCAGAGGCACAGAGAACGAACGAAGCTGGTGGAAGCGAACCCTAGAGTTAGGGTTAGGGTTAGCGGTTAGCTGTTGCTTGAGCTGCGCTGCTGCAGCCTCTATGGATCGCAAGAGGGGAAGGCCTGAGCCTCCTTTCAACGGCAATGGCGCCTCCAAGAAATCCCGCCCAGAATTGGAGTCATTTCCAACTGGTTTAGGAAGCAAATCGAAGCCATGCACAAAGTTTTTCAGTACTTCTGGCTGTCCATTTGGAGAGGGATGCCATTTCCTGCATTATGTTCCTGGTGGCTTCAAAGCTGTCTCTCAGATGATGAACGTTGGTGGCAGTCCTGCTATTCCACAAGTTGGTAGAACACCACCTGTTCCACCATCCTTCCCAGACGGGTCTTCTCCTCCAGTAGTTAAAACCCGATTGTGCAACAAGTATAATTCTGCTGAAGGTTGCAAATTTGGTGACAAATGTCACTATGCTCATGGTGAGTGGGAGATTGGCAAGCCTACAGTCCTTTCATATGACGATAGACAACGGGTGGGTGGCCGAGTTGAGTCCCAAACTCACGGAGCTGCTGCTAGCTTTGGAGCCTCAGCTACTGCAAAGATCAGTATCAATGCCTCCCTAGCTGGAGCTATTATTGGAAAAAATGGAGTCAACTCGAAGCAAATCTGTCGTGTGACAGGAGCAAAACTTTCCATCAGGGAGCATGACTCTGATCCTAACCTTAAAAACATTGAGCTTGAAGGCAGTTTTGATCAGATCAAACAAGCAAGTTCCATGGTTCATGAACTTATTTTGAATGTTAGTTCTGTCTCTGGACCCCCAATGAAGAATACGAATACACATGCCTCTGGCCCTGCAAACAACTTCAAAACTAAGCTGTGTGATAATTTTATGAAAAGCTCCTGCACTTTTGGGGAAAGGTGCCACTTTGCACATGGAACAGAAGAATTACGCAAGTCCGGAATATGA 990 0.4747 MRLAGSAARGTENERSWWKRTLELGLGLAVSCCLSCAAAASMDRKRGRPEPPFNGNGASKKSRPELESFPTGLGSKSKPCTKFFSTSGCPFGEGCHFLHYVPGGFKAVSQMMNVGGSPAIPQVGRTPPVPPSFPDGSSPPVVKTRLCNKYNSAEGCKFGDKCHYAHGEWEIGKPTVLSYDDRQRVGGRVESQTHGAAASFGASATAKISINASLAGAIIGKNGVNSKQICRVTGAKLSIREHDSDPNLKNIELEGSFDQIKQASSMVHELILNVSSVSGPPMKNTNTHASGPANNFKTKLCDNFMKSSCTFGERCHFAHGTEELRKSGI* 330
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev09g2851 329 Pfam Zinc finger C-x8-C-x5-C-x3-H type (and similar) 143 168 IPR000571 GO:0046872
Aev09g2851 329 Pfam Zinc finger C-x8-C-x5-C-x3-H type (and similar) 296 320 IPR000571 GO:0046872
Aev09g2851 329 SMART c3hfinal6 74 101 IPR000571 GO:0046872
Aev09g2851 329 SMART c3hfinal6 295 321 IPR000571 GO:0046872
Aev09g2851 329 SMART c3hfinal6 143 168 IPR000571 GO:0046872
Aev09g2851 329 ProSiteProfiles Zinc finger C3H1-type profile. 74 102 IPR000571 GO:0046872
Aev09g2851 329 SUPERFAMILY CCCH zinc finger 139 171 IPR036855 GO:0046872
Aev09g2851 329 Pfam RNA-binding, Nab2-type zinc finger 79 99 - -
Aev09g2851 329 Gene3D K Homology domain, type 1 199 292 IPR036612 GO:0003723
Aev09g2851 329 ProSiteProfiles Zinc finger C3H1-type profile. 295 322 IPR000571 GO:0046872
Aev09g2851 329 ProSiteProfiles Type-1 KH domain profile. 203 267 - -
Aev09g2851 329 SUPERFAMILY CCCH zinc finger 75 100 IPR036855 GO:0046872
Aev09g2851 329 SUPERFAMILY CCCH zinc finger 295 325 IPR036855 GO:0046872
Aev09g2851 329 PANTHER KH DOMAIN CONTAINING RNA BINDING PROTEIN 48 328 - -
Aev09g2851 329 Pfam KH domain 206 268 IPR004088 GO:0003723
Aev09g2851 329 SUPERFAMILY Eukaryotic type KH-domain (KH-domain type I) 196 274 IPR036612 GO:0003723
Aev09g2851 329 CDD KH-I 207 268 - -
Aev09g2851 329 ProSiteProfiles Zinc finger C3H1-type profile. 142 169 IPR000571 GO:0046872
Aev09g2851 329 Gene3D - 293 327 - -
Aev09g2851 329 Gene3D - 136 173 - -
Aev09g2851 329 SMART kh_6 202 272 IPR004087 GO:0003676
Aev09g2851 329 PANTHER ZINC FINGER CCCH DOMAIN-CONTAINING PROTEIN 14 48 328 - -
Aev09g2851 329 MobiDBLite consensus disorder prediction 44 74 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev09g2851 Aev-Chr9 28693642 28696589 Dispersed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C3H Aev09g2851 KH_1 2.8e-10 CL0007
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev09g2851 - - gmx:100818781 494.967