Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Aev09g2851 | ATGAGGCTGGCTGGCTCAGCTGCCAGAGGCACAGAGAACGAACGAAGCTGGTGGAAGCGAACCCTAGAGTTAGGGTTAGGGTTAGCGGTTAGCTGTTGCTTGAGCTGCGCTGCTGCAGCCTCTATGGATCGCAAGAGGGGAAGGCCTGAGCCTCCTTTCAACGGCAATGGCGCCTCCAAGAAATCCCGCCCAGAATTGGAGTCATTTCCAACTGGTTTAGGAAGCAAATCGAAGCCATGCACAAAGTTTTTCAGTACTTCTGGCTGTCCATTTGGAGAGGGATGCCATTTCCTGCATTATGTTCCTGGTGGCTTCAAAGCTGTCTCTCAGATGATGAACGTTGGTGGCAGTCCTGCTATTCCACAAGTTGGTAGAACACCACCTGTTCCACCATCCTTCCCAGACGGGTCTTCTCCTCCAGTAGTTAAAACCCGATTGTGCAACAAGTATAATTCTGCTGAAGGTTGCAAATTTGGTGACAAATGTCACTATGCTCATGGTGAGTGGGAGATTGGCAAGCCTACAGTCCTTTCATATGACGATAGACAACGGGTGGGTGGCCGAGTTGAGTCCCAAACTCACGGAGCTGCTGCTAGCTTTGGAGCCTCAGCTACTGCAAAGATCAGTATCAATGCCTCCCTAGCTGGAGCTATTATTGGAAAAAATGGAGTCAACTCGAAGCAAATCTGTCGTGTGACAGGAGCAAAACTTTCCATCAGGGAGCATGACTCTGATCCTAACCTTAAAAACATTGAGCTTGAAGGCAGTTTTGATCAGATCAAACAAGCAAGTTCCATGGTTCATGAACTTATTTTGAATGTTAGTTCTGTCTCTGGACCCCCAATGAAGAATACGAATACACATGCCTCTGGCCCTGCAAACAACTTCAAAACTAAGCTGTGTGATAATTTTATGAAAAGCTCCTGCACTTTTGGGGAAAGGTGCCACTTTGCACATGGAACAGAAGAATTACGCAAGTCCGGAATATGA | 990 | 0.4747 | MRLAGSAARGTENERSWWKRTLELGLGLAVSCCLSCAAAASMDRKRGRPEPPFNGNGASKKSRPELESFPTGLGSKSKPCTKFFSTSGCPFGEGCHFLHYVPGGFKAVSQMMNVGGSPAIPQVGRTPPVPPSFPDGSSPPVVKTRLCNKYNSAEGCKFGDKCHYAHGEWEIGKPTVLSYDDRQRVGGRVESQTHGAAASFGASATAKISINASLAGAIIGKNGVNSKQICRVTGAKLSIREHDSDPNLKNIELEGSFDQIKQASSMVHELILNVSSVSGPPMKNTNTHASGPANNFKTKLCDNFMKSSCTFGERCHFAHGTEELRKSGI* | 330 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Aev09g2851 | 329 | Pfam | Zinc finger C-x8-C-x5-C-x3-H type (and similar) | 143 | 168 | IPR000571 | GO:0046872 | |
Aev09g2851 | 329 | Pfam | Zinc finger C-x8-C-x5-C-x3-H type (and similar) | 296 | 320 | IPR000571 | GO:0046872 | |
Aev09g2851 | 329 | SMART | c3hfinal6 | 74 | 101 | IPR000571 | GO:0046872 | |
Aev09g2851 | 329 | SMART | c3hfinal6 | 295 | 321 | IPR000571 | GO:0046872 | |
Aev09g2851 | 329 | SMART | c3hfinal6 | 143 | 168 | IPR000571 | GO:0046872 | |
Aev09g2851 | 329 | ProSiteProfiles | Zinc finger C3H1-type profile. | 74 | 102 | IPR000571 | GO:0046872 | |
Aev09g2851 | 329 | SUPERFAMILY | CCCH zinc finger | 139 | 171 | IPR036855 | GO:0046872 | |
Aev09g2851 | 329 | Pfam | RNA-binding, Nab2-type zinc finger | 79 | 99 | - | - | |
Aev09g2851 | 329 | Gene3D | K Homology domain, type 1 | 199 | 292 | IPR036612 | GO:0003723 | |
Aev09g2851 | 329 | ProSiteProfiles | Zinc finger C3H1-type profile. | 295 | 322 | IPR000571 | GO:0046872 | |
Aev09g2851 | 329 | ProSiteProfiles | Type-1 KH domain profile. | 203 | 267 | - | - | |
Aev09g2851 | 329 | SUPERFAMILY | CCCH zinc finger | 75 | 100 | IPR036855 | GO:0046872 | |
Aev09g2851 | 329 | SUPERFAMILY | CCCH zinc finger | 295 | 325 | IPR036855 | GO:0046872 | |
Aev09g2851 | 329 | PANTHER | KH DOMAIN CONTAINING RNA BINDING PROTEIN | 48 | 328 | - | - | |
Aev09g2851 | 329 | Pfam | KH domain | 206 | 268 | IPR004088 | GO:0003723 | |
Aev09g2851 | 329 | SUPERFAMILY | Eukaryotic type KH-domain (KH-domain type I) | 196 | 274 | IPR036612 | GO:0003723 | |
Aev09g2851 | 329 | CDD | KH-I | 207 | 268 | - | - | |
Aev09g2851 | 329 | ProSiteProfiles | Zinc finger C3H1-type profile. | 142 | 169 | IPR000571 | GO:0046872 | |
Aev09g2851 | 329 | Gene3D | - | 293 | 327 | - | - | |
Aev09g2851 | 329 | Gene3D | - | 136 | 173 | - | - | |
Aev09g2851 | 329 | SMART | kh_6 | 202 | 272 | IPR004087 | GO:0003676 | |
Aev09g2851 | 329 | PANTHER | ZINC FINGER CCCH DOMAIN-CONTAINING PROTEIN 14 | 48 | 328 | - | - | |
Aev09g2851 | 329 | MobiDBLite | consensus disorder prediction | 44 | 74 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Aev09g2851 | Aev-Chr9 | 28693642 | 28696589 | Dispersed |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
TF | C3H | Aev09g2851 | KH_1 | 2.8e-10 | CL0007 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Aev09g2851 | - | - | gmx:100818781 | 494.967 |