Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev09g2821 ATGGCATCAGCATCTTGTGTCAGTAAGAGCCCTTTAACCATGAGAGAGGCATCAGCATCGGCATCAGCTTCAGGCTATTGTGTTTACCCTGCCCCTCTTGCAAGATATGAGGAGATTGCAAACGATCCCACACTCTTCATGTCTACCTTGAAGAAACTCCACGCTTATTTGGGTACCAAGTTCATGATTCCCACTATTGGGGGAAGAGAATTGGATTTGCATCGCCTCTTTGTTGAAGTAACTTCTCGTGGAGGTATTGAGAAGATGATTAAAGAGAGGAAATGGAAAGAAGTAACTTTAGTTTTCAATTTTCCATCAACAGCAACAAATGCTTCTTTTATTCTGCGGAAGTACTATGCTTCATTGCTTTTTCATTATGAACAACTCTACTATTTTAAAGCTTCTGGGTGGTCTTCTCCTGCTTCTGATGTTCTTCAGAGTCAGTTAGCAATTCCAGTTCCAGTTCAAAAGATGCAGGGCCTGCAACCTTTGGCAGGATTTCAATCAAATGTGTTTCAACAGCCAAGTGTTAATGCTGCTGAATTACCCCAAGGCATGACAGTATCTTCAGCAGGGTCTCCAGTCATTGGGATTATTGATGGGAAGTTTGATAGTGGCTATCTAGTTACTGTGACTGTTGGTTCAGAGGTACTTAGAGGTGTGCTTTATCAGGCTCCACAAAACCCCAATTTGCCAGCATCCCATCCTAGTGTTTTGGTTAATAACAATAATGCCTCTACTCCGACGGGCGTCCACCGCCGCCGACGCAGAAAGAAGTCAGAAATTAAGCGTAGAGACCCTGCCCATCCAAAACCAAACCGAAGTGGGTATAATTTCTTCTTTGCAGAGCAGCATGCCAGACTAAAACCACTTAACCAGGGGAAGGACAGGGAAATTAGTAGGACCATTGGTGAACTCTGGAACAAATTAAATGAATCGGAGAAAGTGGTTTATCAAGAGAAGGCTATGAAGGATAAAGAGAGGTACAGAGCAGAAATGGAGGACTATCGCCAGAAACTGAAGATGGGCCAAGTTATCAGTGCTGTGCCTCTTCAACAACTGCTTCCTGAGCCATATGCTGACATGTTGGATGCTGACATGAAACTGGACGAAGCTGATGGCGAGTCTTTTCAAACTCCAGAGGAGAGCAGTTCTGGTGAAAGCGAGTACGAGGACGATGAGAAAGCTACTGAGAAAGATTTCGATACGGATCCATTGCCGGTTGCTGGCGTGAATGCTGAGTCCAGTTGTTTTGGTCCGGATAAGGCATCACAAGCGGGTTTGTGA 1287 0.446 MASASCVSKSPLTMREASASASASGYCVYPAPLARYEEIANDPTLFMSTLKKLHAYLGTKFMIPTIGGRELDLHRLFVEVTSRGGIEKMIKERKWKEVTLVFNFPSTATNASFILRKYYASLLFHYEQLYYFKASGWSSPASDVLQSQLAIPVPVQKMQGLQPLAGFQSNVFQQPSVNAAELPQGMTVSSAGSPVIGIIDGKFDSGYLVTVTVGSEVLRGVLYQAPQNPNLPASHPSVLVNNNNASTPTGVHRRRRRKKSEIKRRDPAHPKPNRSGYNFFFAEQHARLKPLNQGKDREISRTIGELWNKLNESEKVVYQEKAMKDKERYRAEMEDYRQKLKMGQVISAVPLQQLLPEPYADMLDADMKLDEADGESFQTPEESSSGESEYEDDEKATEKDFDTDPLPVAGVNAESSCFGPDKASQAGL* 429
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev09g2821 428 MobiDBLite consensus disorder prediction 232 277 - -
Aev09g2821 428 MobiDBLite consensus disorder prediction 370 428 - -
Aev09g2821 428 CDD HMGB-UBF_HMG-box 270 334 - -
Aev09g2821 428 MobiDBLite consensus disorder prediction 250 264 - -
Aev09g2821 428 Pfam ARID/BRIGHT DNA binding domain 45 127 IPR001606 GO:0003677
Aev09g2821 428 Gene3D High mobility group box domain 254 348 IPR036910 -
Aev09g2821 428 Coils Coil 319 339 - -
Aev09g2821 428 SMART hmgende2 269 338 IPR009071 -
Aev09g2821 428 SMART ARID_2 37 127 - -
Aev09g2821 428 ProSiteProfiles ARID domain profile. 40 131 IPR001606 GO:0003677
Aev09g2821 428 Pfam HMG (high mobility group) box 270 337 IPR009071 -
Aev09g2821 428 MobiDBLite consensus disorder prediction 232 249 - -
Aev09g2821 428 PANTHER HIGH MOBILITY GROUP B PROTEIN 9 3 409 - -
Aev09g2821 428 Gene3D - 32 139 IPR036431 GO:0003677
Aev09g2821 428 SUPERFAMILY ARID-like 38 134 IPR036431 GO:0003677
Aev09g2821 428 ProSiteProfiles HMG boxes A and B DNA-binding domains profile. 270 337 IPR009071 -
Aev09g2821 428 SMART bright_3 41 132 IPR001606 GO:0003677
Aev09g2821 428 PANTHER HIGH MOBILITY GROUP B PROTEIN 15 3 409 - -
Aev09g2821 428 SUPERFAMILY HMG-box 258 345 IPR036910 -
Aev09g2821 428 CDD ARID_HMGB9-like 42 127 IPR045303 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev09g2821 Aev-Chr9 28515591 28518798 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev09g2821 1 369 ARID Transcription Factor Family AT1G04880 59.318 4.17e-133 389
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR ARID Aev09g2821 ARID 1.3e-17 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev09g2821 - - gmx:100783284 591.267