Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev09g2775 ATGATGATGATGATGAAGAGAGAGAGAGAAGTTGATAGCACAACCATGGCTAACTACTTGATGCTGCTTTCTCGTGGAAGTGACATATTCCAGGCCACGGCCACCACAAGCAGCAGCAGCCGGGTGTTTGAGTGCAAGACATGTAACAGACAGTTCTCATCGTTCCAAGCACTGGGAGGGCACCGTGCGAGTCACAAGAAGCCCAGGTTGATGGCGGATGGATCATCGGAGGAGGAGCAGCTTCTTCCTCTTCATGGCTCATCACCGCCGAAGCCTAAGACGCACGAGTGCTCCATCTGTGGCTTGGAGTTTGCGATAGGGCAGGCTCTGGGTGGTCACATGAGGCGTCACAGAGCAACACCATTAACAACTTCTAACACTACTGCCACTGCCACTAGTTTTGATAATCACAACTCATCATCATCACAAAATGGTGATGGGAACAATAAGAAGCCTACTACCAGCAACAAGAGGAAGAGATCATCCTCATCATCACCCGTTTTGTTTCTGGATTTGAATCTGACGCCATTCGAGAATGATTTGGAGTTTTTCAAGATTGGACAGCCTACCACCACTTGTACTTTGGTCGATTGTTTCAATTGA 603 0.4826 MMMMMKREREVDSTTMANYLMLLSRGSDIFQATATTSSSSRVFECKTCNRQFSSFQALGGHRASHKKPRLMADGSSEEEQLLPLHGSSPPKPKTHECSICGLEFAIGQALGGHMRRHRATPLTTSNTTATATSFDNHNSSSSQNGDGNNKKPTTSNKRKRSSSSSPVLFLDLNLTPFENDLEFFKIGQPTTTCTLVDCFN* 201
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev09g2775 200 SMART c2h2final6 43 65 IPR013087 -
Aev09g2775 200 SMART c2h2final6 95 117 IPR013087 -
Aev09g2775 200 ProSitePatterns Zinc finger C2H2 type domain signature. 97 117 IPR013087 -
Aev09g2775 200 PANTHER ZINC FINGER PROTEIN ZAT12 15 186 - -
Aev09g2775 200 Gene3D Classic Zinc Finger 41 117 - -
Aev09g2775 200 MobiDBLite consensus disorder prediction 127 165 - -
Aev09g2775 200 ProSiteProfiles Zinc finger C2H2 type domain profile. 95 117 IPR013087 -
Aev09g2775 200 Pfam C2H2-type zinc finger 95 119 - -
Aev09g2775 200 Pfam C2H2-type zinc finger 42 68 - -
Aev09g2775 200 MobiDBLite consensus disorder prediction 59 93 - -
Aev09g2775 200 ProSitePatterns Zinc finger C2H2 type domain signature. 45 65 IPR013087 -
Aev09g2775 200 SUPERFAMILY beta-beta-alpha zinc fingers 41 117 IPR036236 -
Aev09g2775 200 MobiDBLite consensus disorder prediction 127 151 - -
Aev09g2775 200 ProSiteProfiles Zinc finger C2H2 type domain profile. 43 70 IPR013087 -
Aev09g2775 200 PANTHER ZINC FINGER PROTEIN ZAT5 15 186 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev09g2775 Aev-Chr9 28284536 28285138 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev09g2775 5 181 C2H2 Transcription Factor Family AT3G53600 39.572 4.19e-34 117
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Aev09g2775 zf-C2H2_6 1.1e-09 CL0361
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev09g2775 - - gmx:100500371 216.468
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aev09g2775 09 28284536 28285138 Aev06g0187 06 1465553 1466152 ECH
Aev09g2775 09 28284536 28285138 Aev09g2775 09 28284536 28285138 ECH