Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev09g2756 ATGCCAAAGGGAAACTCATCACAGGGAAGGAAGAGGGTCGACGCGGTCGAGTCTCGTGCCGCTTCTCTTCTTGTTCGAGCCAAGGATGGCAGTGCTTTCGCCAAATGCGATAAGTGCAAGAAGGATGTTCCCGCGGCACTCATCGGCATGCACAGTTGCAGCCTTGAAGCTAAAATCAAAATGAACCTCGAGTCCCAGCTCGTAGAACAGCCTTCTGAAGTCAAAAAGCCAGAGAGGAAGAAGCCCGCTTCGAAAGAACCAAAGGCAAAGAGGACTAAGGTTGAGAAGGTGAAGAAGGTGAAGGATCCTAACATGCCGAAGCGTCCTCCCACCGCCTTCTTTGTATTCTTGGATGACTTCAGGAAATCATTTAAGGAAGCAAACCCTGATTCAAAGGATGTTAAGAGGGTTGGTAAAGAGGCTGGTGAGAAGTGGAAGTCCATGACTGAAGAAGAGAAGAAGCCTTATTTGGATAAGGTTGCTGAGCTTAAGGCAGCATATGATAAGGCTATGGAAAGCTACAAAGCTGGTTCTAATGAAGGAGAAGCAGAAGCAGAAGAGGGGTCAGACAAGTCTGATAAGGAAGCTACTGCTGCAGAAGTGGAAGAGTTGACTGATGAGGAGTAG 627 0.4801 MPKGNSSQGRKRVDAVESRAASLLVRAKDGSAFAKCDKCKKDVPAALIGMHSCSLEAKIKMNLESQLVEQPSEVKKPERKKPASKEPKAKRTKVEKVKKVKDPNMPKRPPTAFFVFLDDFRKSFKEANPDSKDVKRVGKEAGEKWKSMTEEEKKPYLDKVAELKAAYDKAMESYKAGSNEGEAEAEEGSDKSDKEATAAEVEELTDEE* 209
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev09g2756 208 MobiDBLite consensus disorder prediction 179 199 - -
Aev09g2756 208 MobiDBLite consensus disorder prediction 127 152 - -
Aev09g2756 208 Gene3D High mobility group box domain 101 177 IPR036910 -
Aev09g2756 208 SUPERFAMILY HMG-box 97 179 IPR036910 -
Aev09g2756 208 ProSiteProfiles HMG boxes A and B DNA-binding domains profile. 106 175 IPR009071 -
Aev09g2756 208 SMART hmgende2 105 176 IPR009071 -
Aev09g2756 208 MobiDBLite consensus disorder prediction 71 105 - -
Aev09g2756 208 MobiDBLite consensus disorder prediction 173 208 - -
Aev09g2756 208 CDD HMGB-UBF_HMG-box 106 172 - -
Aev09g2756 208 MobiDBLite consensus disorder prediction 67 108 - -
Aev09g2756 208 PANTHER HIGH MOBILITY GROUP B PROTEIN 12-RELATED 4 197 - -
Aev09g2756 208 PANTHER HIGH MOBILITY GROUP B PROTEIN 12-RELATED 4 197 - -
Aev09g2756 208 Pfam HMG (high mobility group) box 106 175 IPR009071 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev09g2756 Aev-Chr9 28185691 28186883 Dispersed/Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR HMG Aev09g2756 HMG_box 4.1e-21 CL0114
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev09g2756 K25507 - gmx:100810345 309.301
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aev09g2756 09 28185691 28186883 Aev09g2756 09 28185691 28186883 ECH