Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev09g2755 ATGACTGCAAAAGTAAACATGTGTGTTAAAGCAGGTCGTCCTGTCCTGAAAGTTGCCGTCGTCGAAGTTGAGGGAATAGCTGAAAGGGTCATAGTTGAAGGTGAAGTTAGTTTTGGGGTTGAGTTGCCTCTTGAGATCTGCTCTGACCCTCCAGAACAGCCTCCTCACCCTTCTCTTCCCACGCACCACAACCATGCCGGCCTCATCACAACACCACCACCACCACCTCATCCCTCTCCTTCTCCTGAGAGAGAGCAAGGAAAGCTATGGAGACCAAAGCAGACTAGGAGGAGGAGAAAGAGTTTGATTAAAGAGTTTGTGGCGGAATTTGGCAGCATTGTTAGGAACCCTGATTTTGGTATTGCTCAACTTGCTAGAATTTACGGGTTTTGTGGATTGGAGAAAGATTTTGGGAAGCTGGAATGTGGTTCAAGTTTCAAGTTGATGCTTGATAATGTGCACCATATTCATGATTTTGTAAACTCAACCTGGAGACTTTGTTCTGTTATAGGTGGTTGGGTTTCTTGTTTAATATATAAACCTTTTAGAAAAGAGGTTGACCCAGCATTTAATGGTTCTCTTTCAAGGTTGGCTGAAGAAAGAGAAAATTGTTATTTAGATTTCATGGATGAATGTATATATATTAGTTCGTCAGATGATGACCTAGAAGAGATAGAAGATCCGAAGAGGATTCTCCCAGACTGGGCTATTCCCAAAAGGAATTCAGATAATGGAGGGCGGTCTAGGCAGGATAGTTCTTCAAGAGGGGCAAATAATTCATACCCTAGCTCTTCAAATGTTAATAAGCCTCATACTCAACCTGTCTCCAGCAACAACACACTGAATCACAAAGTTGCACGGAGAGAAGAACCTTCATATCATACCCAGAATGGTAACACAAGTCAGTATCAAACAGCTAATTCTCGAAGTCCAAATACTTTGGGGGCCGATTATGAGAAAATGTCTCAACAAGCTTTCAAGAGGGTTCTTCCATTGACCCTTCATCCATCTACAACAAGGGCTCCTCCATCTTCATCATTTGCACCAGACAGCAGATTAAGTAACTTGAAAGATAACATGAGCAGCAGTCAGCTTCTTGATACATATAGGAATCGTCGACATGGAGTAGGACCTAGCACAATCAGCGACAAGGGATTCATTCGTGGTAATTATGGCAGGGGAAATGATGAAGATCGTTTCATGCATCAAAATGGTGGTATTAGGATTCTTCCTACATCTTTGACGCATGGGAAGTCTATACCTCCACAATTTGCTAGTTCTAGTGAATCTGCATTCCGTTCTGGAGCAGGTGATGAACGGGCTTCTGGTAATGATGAAAGACTAATTTATGAGGCAGTTATAGAGGACCTCAGTCAATCAAAAACGGAAGCTAATTTACCTGATGGTTTGATGTCTGTCACTCTTCTAAGACATCAGAAAATTGCATTGGCTTGGATGCTTCAGAAGGAAACCAGAAGTTTGCATTGCTTGGGGGGGATTTTGGCTGATGATCAGGGCCTTGGCAAGACAATTTCTATGATTGCTCTCATCCTAATGCAGAGGTCACTGCAGTCAAAATCAAAAACAGATGATAGTAAAACGGAAGCTTTGAATTTGGATGATGATGATGATAATGGTAGTATTGATGTGGAAAAGCTTAAACAGAAGGAAGAATCTGATGATATAAAACCTAGTACTGAACCGAGTAGTTCAACACGAGCACCAAGTAGGAAAAGGCCAGCTGCTGGTACACTGGTTGTTTGCCCTGCAAGTGTTCTTAGACAGTGGGCCAGGGAGCTTCATGAGAAAGTCGATGGACAGCAGGAGCTTAAGGTTTTGATTTACCACGGGGGCAGTAGGACAAAGGATCCTGTTGAACTAGCAGGTTATGATGTGGTCCTCACAACATACTCTATTGTGACTAATGAAGTTCCAAAGCAACCGCTGGTTGAGGAGGATGATATTGATGAAAAAAATGGGGAAAGATTTGGGATATCTTCTGAATTGTTAATCAGTAAAAAAAGGAAACAGTCATACAATGGTGGTAAGAAGAGTAAAAAGGGTAGAAAGGGGATTGACAGTTCTTCTATCGATTGTGCTTCTGGTCCTCTTGCAAAGGTAGGTTGGTTTAGGGTTATTCTAGATGAAGCTCAAACAATAAAGAATCACAGAACTCAGGTGGCTAGAGCTTGTTGCAGCCTCAGGGCCAAAAGAAGGTGGTGCTTATCTGGAACACCTATTCAGAATACTATTGATGATTTATATAGCTACTTTAGGTTCCTGAAGTATGATCCATATGCTGTATATAAATCATTCTACAATACAATAAAAGTTCCAATATCCAGAAATTCTATCCAAGGGTATAAAAAGCTTCAAGCAGTCTTGAGGGCCATTATGCTTCGCCGTACAAAAGGAACTTTGATTGATGGGAAGCCAATAATCAATTTACCCCCTAAAACAATTGAGCTAACAAAGGTGGATTTCTCCATTGAGGAGCGGGCCTTCTACAAGAAATTGGAATTAGATTCACAATCTCAGTTTAAGGCATATGCTGCTGCTGGCACGGTGAATCAAAACTATGCAAATATTCTTTTAATGCTTTTACGTCTCCGTCAGGCTTGTGACCACCCGCGTCTTGTTAAAGATTATTATTCTGATCCGCTGGGGAAAAATTCTGTTGAAATGGCAAGCAAGCTACCGAAGGACATGCTGATAAATCTGTTTAATAGTTTGGAAACAACCTTTGCGATATGCCTTGCTTGTGATGATCCTCCTGAAGACCCTGTTGTCACGATGTGTGGCCATGTCTTCTGTTATCAATGTGTATCAGAAAGTTTGACTGGTGATGATAATACATGCCCTGCAATGGATTGTAAAGCAGCAATTGCTGATGATGTTGTTTTCTCCAAAGCTACTTTGAGGAGTTGCATCGCTGAAGATGTTGGTGGTAGTAGTTCCAAAACTTCAGATGATTTTGATCATTCGCTAGTGCAGCATGAAGATTACAGTTCATCTAAAATCAAAGCTGTCCTTGAGATTCTGCAGTCAAATTGTCAATTGAAGACTCCTAGTTCTAGAGGTTCACCGTCTTCTGATGATGTTGAAATCTGTGACTCAGACGCTAGGGTTACAAAACACACAAGAAAATATTCGGAGCCTTCAACTGAAGGACCAATAAAGGCTATTGTTTTTTCCCAGTGGACTAGCATGTTGGACTTAGTTGAGTCATCGTTGAGACAATCCCACATACGATACAGGAGACTTGATGGTAGGATGACTCTGCTTGCAAGGGACAGATCTGTTAAGGATTTCAATACTGATCCTGAGGTAACTGTTATGCTGATGTCACTCAAAGCAGGGAATCTTGGTTTAAATATGGTTGCTGCATGTCATGTTATTCTTTTGGATCTTTGGTGGAATCCGACAACTGAAGATCAAGCAGTGGACCGAGCTCATAGAATTGGACAGACTCGTCCTGTTACTGTAACACGGCTCACTATAAAAGATACAGTTGAAGATAGAATTCTGGCTCTTCAGGAGGACAAGAGAAAAATGGTTGCATCAGCTTTTGGTGAAGAGCATGCTGGCAGTTCCGTGACTCGCCTTACGGTGGATGATCTCAAATATCTTTTCATGGTATAG 3642 0.4163 MTAKVNMCVKAGRPVLKVAVVEVEGIAERVIVEGEVSFGVELPLEICSDPPEQPPHPSLPTHHNHAGLITTPPPPPHPSPSPEREQGKLWRPKQTRRRRKSLIKEFVAEFGSIVRNPDFGIAQLARIYGFCGLEKDFGKLECGSSFKLMLDNVHHIHDFVNSTWRLCSVIGGWVSCLIYKPFRKEVDPAFNGSLSRLAEERENCYLDFMDECIYISSSDDDLEEIEDPKRILPDWAIPKRNSDNGGRSRQDSSSRGANNSYPSSSNVNKPHTQPVSSNNTLNHKVARREEPSYHTQNGNTSQYQTANSRSPNTLGADYEKMSQQAFKRVLPLTLHPSTTRAPPSSSFAPDSRLSNLKDNMSSSQLLDTYRNRRHGVGPSTISDKGFIRGNYGRGNDEDRFMHQNGGIRILPTSLTHGKSIPPQFASSSESAFRSGAGDERASGNDERLIYEAVIEDLSQSKTEANLPDGLMSVTLLRHQKIALAWMLQKETRSLHCLGGILADDQGLGKTISMIALILMQRSLQSKSKTDDSKTEALNLDDDDDNGSIDVEKLKQKEESDDIKPSTEPSSSTRAPSRKRPAAGTLVVCPASVLRQWARELHEKVDGQQELKVLIYHGGSRTKDPVELAGYDVVLTTYSIVTNEVPKQPLVEEDDIDEKNGERFGISSELLISKKRKQSYNGGKKSKKGRKGIDSSSIDCASGPLAKVGWFRVILDEAQTIKNHRTQVARACCSLRAKRRWCLSGTPIQNTIDDLYSYFRFLKYDPYAVYKSFYNTIKVPISRNSIQGYKKLQAVLRAIMLRRTKGTLIDGKPIINLPPKTIELTKVDFSIEERAFYKKLELDSQSQFKAYAAAGTVNQNYANILLMLLRLRQACDHPRLVKDYYSDPLGKNSVEMASKLPKDMLINLFNSLETTFAICLACDDPPEDPVVTMCGHVFCYQCVSESLTGDDNTCPAMDCKAAIADDVVFSKATLRSCIAEDVGGSSSKTSDDFDHSLVQHEDYSSSKIKAVLEILQSNCQLKTPSSRGSPSSDDVEICDSDARVTKHTRKYSEPSTEGPIKAIVFSQWTSMLDLVESSLRQSHIRYRRLDGRMTLLARDRSVKDFNTDPEVTVMLMSLKAGNLGLNMVAACHVILLDLWWNPTTEDQAVDRAHRIGQTRPVTVTRLTIKDTVEDRILALQEDKRKMVASAFGEEHAGSSVTRLTVDDLKYLFMV* 1214
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev09g2755 1213 MobiDBLite consensus disorder prediction 525 582 - -
Aev09g2755 1213 MobiDBLite consensus disorder prediction 47 97 - -
Aev09g2755 1213 Pfam SNF2-related domain 478 880 IPR000330 GO:0005524|GO:0140658
Aev09g2755 1213 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 811 1212 IPR027417 -
Aev09g2755 1213 Gene3D - 568 656 IPR038718 -
Aev09g2755 1213 MobiDBLite consensus disorder prediction 418 442 - -
Aev09g2755 1213 MobiDBLite consensus disorder prediction 547 564 - -
Aev09g2755 1213 Gene3D - 666 813 IPR038718 -
Aev09g2755 1213 Gene3D - 449 535 IPR038718 -
Aev09g2755 1213 MobiDBLite consensus disorder prediction 418 433 - -
Aev09g2755 1213 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 906 968 IPR013083 -
Aev09g2755 1213 MobiDBLite consensus disorder prediction 335 356 - -
Aev09g2755 1213 Pfam Zinc finger, C3HC4 type (RING finger) 918 954 - -
Aev09g2755 1213 SMART ultradead3 471 781 IPR014001 -
Aev09g2755 1213 ProSiteProfiles Superfamilies 1 and 2 helicase ATP-binding type-1 domain profile. 490 764 IPR014001 -
Aev09g2755 1213 MobiDBLite consensus disorder prediction 247 282 - -
Aev09g2755 1213 Gene3D - 817 1212 IPR027417 -
Aev09g2755 1213 MobiDBLite consensus disorder prediction 292 315 - -
Aev09g2755 1213 ProSiteProfiles Zinc finger RING-type profile. 918 954 IPR001841 -
Aev09g2755 1213 CDD SF2_C_SNF 1056 1165 - -
Aev09g2755 1213 SMART ring_2 918 956 IPR001841 -
Aev09g2755 1213 MobiDBLite consensus disorder prediction 233 315 - -
Aev09g2755 1213 PANTHER HELICASE-LIKE TRANSCRIPTION FACTOR CHR28 259 1212 - -
Aev09g2755 1213 CDD DEXDc_SHPRH-like 475 802 - -
Aev09g2755 1213 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 465 802 IPR027417 -
Aev09g2755 1213 ProSitePatterns Zinc finger RING-type signature. 933 942 IPR017907 -
Aev09g2755 1213 MobiDBLite consensus disorder prediction 676 696 - -
Aev09g2755 1213 Pfam Helicase conserved C-terminal domain 1059 1155 IPR001650 -
Aev09g2755 1213 PANTHER TRANSCRIPTION TERMINATION FACTOR 2-RELATED 259 1212 - -
Aev09g2755 1213 SUPERFAMILY RING/U-box 914 955 - -
Aev09g2755 1213 MobiDBLite consensus disorder prediction 337 356 - -
Aev09g2755 1213 ProSiteProfiles Superfamilies 1 and 2 helicase C-terminal domain profile. 1042 1208 IPR001650 -
Aev09g2755 1213 SMART helicmild6 1072 1155 IPR001650 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev09g2755 Aev-Chr9 28173277 28184846 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev09g2755 209 1113 RAD5 or RAD16-like Gene Family AT1G50410 55.520 0.0 887
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR SNF2 Aev09g2755 SNF2_N 6e-69 CL0023
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev09g2755 - - lang:109335781 1583.54
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aev09g2755 09 28173277 28184846 Aev09g2755 09 28173277 28184846 ECH