Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev09g2746 ATGTCGGAGTCACCGTCTCAGCCTCCACCTCCTTCAACTGAAACGCCGCCGTACTGGTGCTACCACTGCGAGAAGCGCGTCTCCGTCGAGACACTCCCCAACCTACCTGACGTCATCTGCGGTGACTGCAAGAACGGCTTCGTCGAATCCATACCTACACCCTCCCTCCCCTCCGCCGCCTCCGCCTCCGCCGCCGCTGCCTCCTCTTCTGACGATCCTTACTTCGGCTCCCACTTCCTCCAGGTTCTCCGCTTAATCGCTCAGTCAGCGCGTGACGACGACGCGTCTCCTCCTCCTCCGCCTAACCGCTCCCCGGAGAACGATTTCCTTAGGATCGAGCTCGGCGGCTGGGACAACGACGATGACGATGATGAAGACGATGACGACGACGATGATAACGAAAACGGCGTCGAGTTTCACAACGACGGTGAAGATCACCAAAACGCCGTCGAGGAGCGAGAAGATCGGATCGGAAACGAGGATCCGCCCGGTGACGACGAGGATCTGAGGCGGAGGAGGCGCGAGCTGCTTAGGCTCCGAATTAGGGATTTGGCGACCCGAACGAGGAGCATGCGGAACCGGATCTTGGATTGGGCCGAGATCCTGATGGGCCTGGAGGACAATTCCATCGAGCTCCGCCTTCAGCTGCCGGATTCCGACCGCTACGTGGGAAACCCTGAGGACTACGTCGACGCGGCGGAGTACGAGGCGCTGCTACAGACGCTGGCGGAGAGCGACGCGGGGAGCGGGAGGAGAGGAGCTCCGCCGGCATCAAAGGCGGCGGTGGAGGCGCTGTCGACGGTGAAGATCGGGTCGGAGAGCGAGACAGTAGTTTGCGCAGTGTGCAAGGATACGGTAGGAGTTGGTGAGGTGGCGAAGAGGCTGCCGTGTGGGCACGAGTACCATGGAGACTGCATTGTTCCATGGTTGGGTTCCAGAAACTCGTGCCCTGTCTGCAGGTTCGAACTTCCTACTGATGATAAGGAGTATGAGGAGGAGAGGAAGAAGAACAAGAGGGTTCTCAACAATAATAATATAATATAA 1044 0.591 MSESPSQPPPPSTETPPYWCYHCEKRVSVETLPNLPDVICGDCKNGFVESIPTPSLPSAASASAAAASSSDDPYFGSHFLQVLRLIAQSARDDDASPPPPPNRSPENDFLRIELGGWDNDDDDDEDDDDDDDNENGVEFHNDGEDHQNAVEEREDRIGNEDPPGDDEDLRRRRRELLRLRIRDLATRTRSMRNRILDWAEILMGLEDNSIELRLQLPDSDRYVGNPEDYVDAAEYEALLQTLAESDAGSGRRGAPPASKAAVEALSTVKIGSESETVVCAVCKDTVGVGEVAKRLPCGHEYHGDCIVPWLGSRNSCPVCRFELPTDDKEYEEERKKNKRVLNNNNII* 348
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev09g2746 347 PANTHER AMINOACYLTRANSFERASE, E1 UBIQUITIN-ACTIVATING ENZYME-RELATED 32 340 - -
Aev09g2746 347 MobiDBLite consensus disorder prediction 139 169 - -
Aev09g2746 347 ProSiteProfiles Zinc finger RING-type profile. 279 320 IPR001841 -
Aev09g2746 347 SMART ring_2 279 319 IPR001841 -
Aev09g2746 347 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 245 326 IPR013083 -
Aev09g2746 347 MobiDBLite consensus disorder prediction 50 73 - -
Aev09g2746 347 MobiDBLite consensus disorder prediction 91 169 - -
Aev09g2746 347 MobiDBLite consensus disorder prediction 51 70 - -
Aev09g2746 347 SUPERFAMILY RING/U-box 274 326 - -
Aev09g2746 347 Pfam Ring finger domain 279 320 IPR001841 -
Aev09g2746 347 PANTHER RING FINGER AND PROTEASE ASSOCIATED DOMAIN-CONTAINING 32 340 - -
Aev09g2746 347 MobiDBLite consensus disorder prediction 117 138 - -
Aev09g2746 347 Pfam zinc-ribbon 18 51 IPR039525 GO:0061630
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev09g2746 Aev-Chr9 28119757 28120800 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev09g2746 189 335 C3H Transcription Factor Family AT5G01980 45.455 6.94e-33 125
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev09g2746 - - adu:107467499 503.442
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aev09g2746 09 28119757 28120800 Aev09g2746 09 28119757 28120800 ECH