Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev09g2736 ATGTCGTCCGGCGAGGTTGCCGCCGGCGGAGCTAAGCCGTACTTCTGCCATGTGTGTACACAGAGGATCACCGTCTCCGATGAATCTGAGCCTTTCTGCCCGATCTGCCTCCAAGGCTTCGTCGAAGAATACACCAACCCTAATCCCGATCCCAACCCTTTCTCTAACCCTAGCTTCTCCTTCGGATTCGACTCCGATCCCTCTTCCGATCCTCATTTCCCCTTCCATCCCTTATCTTTTCTTCCTTTCTTGCTATCCTCCGCCTCCAGCACCACCATCGACCTCCAGAACCCTCGAATCTTCTCAGGTTCATCAGGATCCAGAACCCGTCCTGATTTCCCCGATTCCGAGATGTTCGACCCGTTTCTCTTCCTCCAGAACCACCTTCAAGGCCTTCGCGCTGATGGAACAAACGTCCAGTTCGAGATCAACCACCCTTCTGAGCCAGGGTTTCGCCTTCCGACGAATATCGGCGATTACTTCCTTGGTCCTGGCCTCGAGCAGTTGATCCAGCAGCTCGCCGAGAACGACCCCAACCGTTACGGGACACCGCCGGCTTCGAAATCCGCCATCGAGAATCTCCCGACGATTACCGTGGACGACGAGCTGCTGAACTCGGAGCATAACCAGTGCGCGGTTTGCCAGGACGAGTTCGAGAAGGGCTCGCAGGTGAAGCAGATGCCATGCAAGCACGTGTACCACGATGAGTGCTTGCTGCCGTGGCTTCAGTTGCATAATTCTTGCCCTGTTTGCCGGTATGAGTTGCCCACTGACGATCCCGACTATGAGAACCGGACGCCCAGGGGGAATGGTGGTGATGGTTCCAGGTCTGGCGGCGGCGGCGGCGGCGGCGTTGACAGTGTTAGTGGTGATGGTGGCGGCGATGGAGGGGGAAATAGGACACCTATTCAGAGGACTGTTAGAATATCTTTGCGGTATCCTTTTGGTGCAGCTCATAAAGAAGCAATAGAGACCACCAAAGAAGGACAGAACAGAAAAGAAAGGGAAAGGAAAGGAAAGGCCCTGAAAACTACCATGGATAAAGCTGTTTGTCTTTATGCATCTTTGGGGCTATTTGCAGGTTCATTTTTCAGCTCATGCATTTCTGGGACTCCCAGATGCTTTGGGGCAGAACAAGATTGCTATCTCTCAAGCAGCATTGGAAAATATCTCAGCAGTCTGTTAGAAACCATTTACATTTGCTTCCTGATTGTGGCACTTAAGGTTCTCGGTGGCAATCAAGTTTTATCATCATCAGCACCTTCTTATACAATGACCATGCCATTTTGGGTGGCATTTACACTGTCAATTACCTACATGTCACAGTTCTCATTAACCTGA 1341 0.5183 MSSGEVAAGGAKPYFCHVCTQRITVSDESEPFCPICLQGFVEEYTNPNPDPNPFSNPSFSFGFDSDPSSDPHFPFHPLSFLPFLLSSASSTTIDLQNPRIFSGSSGSRTRPDFPDSEMFDPFLFLQNHLQGLRADGTNVQFEINHPSEPGFRLPTNIGDYFLGPGLEQLIQQLAENDPNRYGTPPASKSAIENLPTITVDDELLNSEHNQCAVCQDEFEKGSQVKQMPCKHVYHDECLLPWLQLHNSCPVCRYELPTDDPDYENRTPRGNGGDGSRSGGGGGGGVDSVSGDGGGDGGGNRTPIQRTVRISLRYPFGAAHKEAIETTKEGQNRKERERKGKALKTTMDKAVCLYASLGLFAGSFFSSCISGTPRCFGAEQDCYLSSSIGKYLSSLLETIYICFLIVALKVLGGNQVLSSSAPSYTMTMPFWVAFTLSITYMSQFSLT* 447
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev09g2736 446 MobiDBLite consensus disorder prediction 255 303 - -
Aev09g2736 446 Pfam zinc-ribbon 13 44 IPR039525 GO:0061630
Aev09g2736 446 PANTHER OS06G0101300 PROTEIN 9 326 - -
Aev09g2736 446 Pfam Ring finger domain 209 252 IPR001841 -
Aev09g2736 446 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 173 258 IPR013083 -
Aev09g2736 446 CDD RING-H2_RNF126_like 210 252 - -
Aev09g2736 446 ProSiteProfiles Zinc finger RING-type profile. 211 252 IPR001841 -
Aev09g2736 446 SUPERFAMILY RING/U-box 190 259 - -
Aev09g2736 446 PANTHER E3 UBIQUITIN-PROTEIN LIGASE PRAJA 9 326 - -
Aev09g2736 446 SMART ring_2 211 251 IPR001841 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev09g2736 Aev-Chr9 28068340 28072730 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev09g2736 155 263 C3H Transcription Factor Family AT5G01980 47.706 5.66e-31 122
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev09g2736 K11982 - lja:Lj5g3v2258550.1 353.214