Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev09g2732 ATGGAGAACGACACCGCCGCCAGCAACAACGCCAACGCCGCCGCGAAAGTGGGTTCAGCGGGAATCGGAGGGAAATCGAGCAACCACAGCGAGGAGGAGGAGCGTCCCAATTTGAACGGTGAGGATCACGTGATGATGGCGGAGCAAGATGATGAAGAAGAGGAAGAAGGAGCAGGAGGAGGGAATGGAGACGGTGAAGGGGAACCTGCTGGATCTGTAGCACCGAACCCTTCTCGCCAACCTTCGAGAACCCCTTTCACCAATCTCAGCCAGGTCGATGCTGACCTAGCCCTCGCCCGAACCCTACAGGAACAGGTTCTCTCTCTTTCTTCCTCTTATTTTGATTCTATTCTTCGCGTTTGGGCATTACATGAGGCTGAAGAGAGGGAAATGGCGGCAAGACTCCTGGCTCTGGCTGGTATAAATGATCAGGAGGCTGAGGACGCAGAGGAGCATGGTGGTAATTCTCAGGATGCATGGGAAGATGTTGATCCAGATGAACTTTCATATGAGGAGCTACTGGCATTGGGAGAAGTAGTTGGAACTGAGAGCAGAGGTCTTTCAACCGATACTATTGCTGGTTTGCCTTCAATCAAGTACAAGACTGGGAGTGAGCAACATGGAAGCAATGATTCTTGTGTCATTTGCCGGATGGACTATGAGGATGGCGAGTCCTTGACAGTTCTTTCTTGCAAACATCTGTACCATCCCGAGTGCATCAACAATTGGTTGAAAATAAACAAGGTTTGCCCTGTTTGCAGTACTGAGGTATCTGCTCCTGGGAGCAGCTTGTAG 795 0.5094 MENDTAASNNANAAAKVGSAGIGGKSSNHSEEEERPNLNGEDHVMMAEQDDEEEEEGAGGGNGDGEGEPAGSVAPNPSRQPSRTPFTNLSQVDADLALARTLQEQVLSLSSSYFDSILRVWALHEAEEREMAARLLALAGINDQEAEDAEEHGGNSQDAWEDVDPDELSYEELLALGEVVGTESRGLSTDTIAGLPSIKYKTGSEQHGSNDSCVICRMDYEDGESLTVLSCKHLYHPECINNWLKINKVCPVCSTEVSAPGSSL* 265
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev09g2732 264 MobiDBLite consensus disorder prediction 27 45 - -
Aev09g2732 264 ProSiteProfiles Zinc finger RING-type profile. 213 254 IPR001841 -
Aev09g2732 264 MobiDBLite consensus disorder prediction 46 61 - -
Aev09g2732 264 MobiDBLite consensus disorder prediction 1 15 - -
Aev09g2732 264 PANTHER E3 UBIQUITIN LIGASE BIG BROTHER-RELATED 26 105 - -
Aev09g2732 264 PANTHER E3 UBIQUITIN LIGASE BIG BROTHER-RELATED 122 260 - -
Aev09g2732 264 Pfam Ring finger domain 211 253 IPR001841 -
Aev09g2732 264 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 178 260 IPR013083 -
Aev09g2732 264 CDD RING-H2_PA-TM-RING 213 253 - -
Aev09g2732 264 PANTHER E3 UBIQUITIN LIGASE BIG BROTHER-RELATED 26 105 IPR043312 -
Aev09g2732 264 PANTHER E3 UBIQUITIN LIGASE BIG BROTHER-RELATED 122 260 IPR043312 -
Aev09g2732 264 SMART ring_2 213 253 IPR001841 -
Aev09g2732 264 MobiDBLite consensus disorder prediction 1 86 - -
Aev09g2732 264 SUPERFAMILY RING/U-box 202 259 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev09g2732 Aev-Chr9 28056772 28059710 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev09g2732 145 257 C3H Transcription Factor Family AT3G63530 54.622 1.53e-35 125
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev09g2732 K19045 - gmx:100787418 258.07